Wednesday, September 12, 2018 Shell V

The ACF is down all day, so no in person meeting. However, there is still plenty of material that you need to go through on your own:

• Slides - Overview of high throughput sequencing
• Video of presentation
• Learn how sequencing works
  • Illumina
  • PacBio
  • Oxford Nanopore
• go through the Software Carpentry linux lesson on shell scripts on your own:
  • Shell Scripts
• Lets practice a BLAST shell script
  • Video of the BLAST shell script lesson
• Reading more about sequencing
  • Mardis 2016. DNA sequencing technologies: 2006–2016
  • Interested in 3rd gen or single molecule technologies, especially for genome assembly? check out this blog post from the National Center for Genome Analysis Support