update package lifecycle to maturing

.github/workflows/pkgdown.yaml

@@ -0,0 +1,77 @@
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
+on:
+  push:
+    branches: [main, master]
+    paths:
+      - 'README.Rmd'
+      - 'README.md'
+      - 'index.Rmd'
+      - 'index.md'
+      - 'man/**'
+      - 'vignettes/**'
+      - '_pkgdown.yml'
+      - 'pkgdown/**'
+      - 'DESCRIPTION'
+      - '.Rbuildignore'
+      - '.github/**'
+  pull_request:
+    paths:
+      - 'README.Rmd'
+      - 'README.md'
+      - 'index.Rmd'
+      - 'index.md'
+      - 'man/**'
+      - 'vignettes/**'
+      - '_pkgdown.yml'
+      - 'pkgdown/**'
+      - 'DESCRIPTION'
+      - '.Rbuildignore'
+      - '.github/**'
+  release:
+    types: [published]
+  workflow_dispatch:
+
+name: pkgdown
+
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
+
+jobs:
+  pkgdown:
+    runs-on: ubuntu-latest
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    permissions:
+      contents: write
+    steps:
+      - uses: actions/checkout@v3
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: any::pkgdown, local::.
+          needs: website
+
+      - name: Build site
+        run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
+        shell: Rscript {0}
+
+      - name: Deploy to GitHub pages 🚀
+        if: github.event_name != 'pull_request'
+        uses: JamesIves/[email protected]
+        with:
+          # We clean on releases because we want to remove old vignettes, 
+          # figures, etc. that have been deleted from the `main` branch.
+          # But we clean ONLY on releases because we want to be able to keep
+          # both the 'stable' and 'dev' websites.
+          # Also discussed in https://github.com/r-lib/actions/issues/484
+          clean: ${{ github.event_name == 'release' }}
+          branch: gh-pages
+          folder: docs

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: sivirep
 Title: Data Wrangling and Automated Reports from 'SIVIGILA' source
 Type: Package
-Version: 0.0.1.0
+Version: 0.0.2.0
 Authors@R: 
   c(
     person("Zulma M. Cucunubá", role = "aut"),

NAMESPACE

@@ -1,50 +1,61 @@
 # Generated by roxygen2: do not edit by hand
 
-export(clean_depto_codes)
-export(clean_depto_disease_codes)
-export(clean_disease_ages)
-export(clean_disease_dates)
-export(clean_header)
-export(cleansing_sivigila_data)
-export(concatenate_values_token)
-export(filter_disease)
-export(format_dates_values)
-export(get_depto_codes)
-export(get_depto_names)
-export(get_months_most_cases)
-export(get_most_cases)
-export(get_name_file_path)
+export(agrupar_casos_semanaepi)
+export(agrupar_cols_casos)
+export(agrupar_dpto)
+export(agrupar_edad)
+export(agrupar_edad_sex)
+export(agrupar_fecha_inisintomas)
+export(agrupar_fecha_notifica)
+export(agrupar_mun)
+export(agrupar_pob_especial)
+export(agrupar_rango_edad_casos)
+export(agrupar_sex)
+export(agrupar_sex_semanaepi)
+export(concatenar_vals_token)
+export(convert_edad)
+export(estandarizar_geo_cods)
+export(filtrar_event)
+export(format_fecha)
+export(geo_filtro)
 export(get_path_data_disease_year)
-export(get_special_population_cases)
-export(group_age)
-export(group_age_range_cases)
-export(group_age_sex)
-export(group_columns_cases)
-export(group_dept)
-export(group_epiweek_cases)
-export(group_notification_date)
-export(group_onset_symptoms)
-export(group_sex)
-export(group_sex_epiweek)
-export(group_special_population)
-export(import_data_endemic_channel)
-export(import_data_separator)
-export(import_geo_codes)
-export(import_linelist_disease_year)
-export(import_sivigila_summary_data)
-export(list_available_diseases_years)
-export(parse_age_to_years)
-export(plot_age)
-export(plot_age_sex)
-export(plot_dept_map)
-export(plot_epiweek)
-export(plot_notification_date)
-export(plot_onset_symptoms)
+export(import_data_canal_endemico)
+export(import_data_event)
+export(import_data_resumen_sivigila)
+export(import_geo_cods)
+export(import_sep_data)
+export(limpiar_cods_dpto)
+export(limpiar_cods_event_dpto)
+export(limpiar_data_sivigila)
+export(limpiar_edad_event)
+export(limpiar_encabezado)
+export(limpiar_fecha_event)
+export(limpiar_val_atipic)
+export(list_events)
+export(modficar_cod_mun)
+export(obtener_casos_pob_especial)
+export(obtener_cods_dpto)
+export(obtener_dptos)
+export(obtener_fila_mas_casos)
+export(obtener_info_depts)
+export(obtener_meses_mas_casos)
+export(obtener_nombres_dptos)
+export(obtener_nombres_muns)
+export(obtener_ruta_descarga)
+export(obtener_tip_ocurren_geo)
+export(plot_edad)
+export(plot_edad_sex)
+export(plot_fecha_inisintomas)
+export(plot_fecha_notifica)
+export(plot_map)
+export(plot_map_dpto)
+export(plot_muns)
+export(plot_pob_especial)
+export(plot_semanaepi)
 export(plot_sex)
-export(plot_sex_epiweek)
-export(plot_special_population)
+export(plot_sex_semanaepi)
 export(plot_variable)
-export(remove_error_dates)
-export(remove_nin_values)
+export(remove_error_fecha)
+export(remove_val_nin)
 import(dplyr)
 importFrom(dplyr,"%>%")