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@epiverse-trace

Epiverse-TRACE

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  1. sivirep sivirep Public

    Data Wrangling and Automated Reports from 'SIVIGILA' source

    R 40 3

  2. epiparameter epiparameter Public

    R package with library of epidemiological parameters for infectious diseases and functions and classes for working with parameters

    R 32 11

  3. serofoi serofoi Public

    Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

    R 17 4

  4. vaccineff vaccineff Public

    R package with tools for estimating vaccine effectiveness and vaccine related metrics

    R 14 2

  5. cfr cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    R 13 3

  6. finalsize finalsize Public

    R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility

    R 11 7

Repositories

Showing 10 of 59 repositories
  • .github Public
    epiverse-trace/.github’s past year of commit activity
    1 1 4 0 Updated Oct 26, 2024
  • sivirep Public

    Data Wrangling and Automated Reports from 'SIVIGILA' source

    epiverse-trace/sivirep’s past year of commit activity
    R 40 3 13 3 Updated Oct 25, 2024
  • epidemics Public

    A library of published compartmental epidemic models, and classes to represent demographic structure, non-pharmaceutical interventions, and vaccination regimes, to compose epidemic scenarios.

    epiverse-trace/epidemics’s past year of commit activity
    R 8 2 16 (1 issue needs help) 1 Updated Oct 25, 2024
  • gam-summit Public
    epiverse-trace/gam-summit’s past year of commit activity
    CSS 0 2 0 0 Updated Oct 25, 2024
  • epitkit Public
    epiverse-trace/epitkit’s past year of commit activity
    R 0 1 3 1 Updated Oct 25, 2024
  • cleanepi Public

    R package to clean and standardize epidemiological data

    epiverse-trace/cleanepi’s past year of commit activity
    R 8 3 22 2 Updated Oct 25, 2024
  • epiparameterDB Public
    epiverse-trace/epiparameterDB’s past year of commit activity
    R 0 0 0 2 Updated Oct 25, 2024
  • tutorials-late Public
    epiverse-trace/tutorials-late’s past year of commit activity
    R 2 1 28 4 Updated Oct 25, 2024
  • epiparameter Public

    R package with library of epidemiological parameters for infectious diseases and functions and classes for working with parameters

    epiverse-trace/epiparameter’s past year of commit activity
    R 32 11 53 (3 issues need help) 0 Updated Oct 25, 2024
  • cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    epiverse-trace/cfr’s past year of commit activity
    R 13 3 10 3 Updated Oct 25, 2024
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