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337 Open 706 Closed
337 Open 706 Closed
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Issues list

FieldError: Cannot resolve keyword 'cohortgenotype_840' into field. Choices are: all_zygosity_counts_1, allvariantsnode, alt, alt_id, classification, clinvar, cohortgenotype, cohortgenotype_668, commonvariantclassified, createdmanualvariant, end, germline
#1196 opened Nov 15, 2024 by davmlaw
1
Upload poll - backoff strategy
#1195 opened Nov 8, 2024 by davmlaw
@davmlaw
Bcftools liftover - reference check alwys fails on symbolic variants Liftover Reference base
#1194 opened Nov 8, 2024 by davmlaw
@davmlaw
1
Annotation Run - restart / fix - improve documentation
#1193 opened Nov 8, 2024 by davmlaw VG4 non-critical
SeqAPI - reload VCF in place
#1192 opened Nov 7, 2024 by davmlaw VG4 non-critical
Reload VCF - sample order switched
#1191 opened Nov 7, 2024 by davmlaw
subprocess.CalledProcessError: Command '['bcftools', 'index', '/mnt/variantgrid/data/import_processing/pipeline_7783/split_vcf/dragen_mutect_vardict_shared00.vcf.gz']' returned non-zero exit status 255.
#1190 opened Nov 6, 2024 by davmlaw
IndexError: list index out of range
#1189 opened Nov 6, 2024 by davmlaw
@davmlaw
User Feedback : unable to tag variant
#1188 opened Oct 24, 2024 by davmlaw
LiftoverError - null value in column "conversion_tool"
#1186 opened Oct 23, 2024 by davmlaw
2
Classification - select lab
#1185 opened Oct 21, 2024 by davmlaw SA Path VG 4
RuntimeError: Search Backend failed: Couldn't resolve #PMQuerySrv_2_0?dbaf=pubmed, the address table is empty.
#1184 opened Oct 17, 2024 by davmlaw
2
DevRecDX? - Simplify code base. Move non-Django scripts into "scripts" folder
#1183 opened Oct 16, 2024 by davmlaw
Investigate Django settings best practices / patterns / libraries etc
#1182 opened Oct 16, 2024 by davmlaw
SeqAuto model changes
#1181 opened Oct 16, 2024 by davmlaw VG4 non-critical
Create cohort - should join format/info fields properly
#1180 opened Oct 8, 2024 by davmlaw VG4 non-critical
Bcftools fails in pipeline without being caught
#1179 opened Oct 8, 2024 by davmlaw VG4 non-critical
Global variants grid - OperationalError: canceling statement due to statement timeout
#1176 opened Oct 3, 2024 by davmlaw
User page - show data / objects made by that user
#1174 opened Sep 23, 2024 by davmlaw
Download offline CSV/VCF part 2 (polish)
#1173 opened Sep 23, 2024 by davmlaw
CachedGeneratedFiles improvements
#1172 opened Sep 19, 2024 by davmlaw VG4 non-critical
DevRecT2 - Enhance automated web tests
#1168 opened Sep 9, 2024 by TheMadBug
DevRecT1 - Fixture setup for testing (and potentially dev setup)
#1167 opened Sep 9, 2024 by TheMadBug
1
DevRecS3 - Run services as separate processes with different virtual environments
#1166 opened Sep 9, 2024 by TheMadBug
DevRecS2 - Improve package management to lessen supply chain attack possibilities.
#1165 opened Sep 9, 2024 by TheMadBug
ProTip! What’s not been updated in a month: updated:<2024-10-16.