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    51 repositories

    • Minimally-Processed-Image-Sharing

      Public
      Python
      •0•3•0•0•Updated Sep 17, 2024Sep 17, 2024

    • RSI

      Public
      Code to fit a Restriction Spectrum Imaging Model to Diffusion MRI Data
      Python
      •
      MIT License
      •1•3•0•0•Updated Sep 4, 2024Sep 4, 2024

    • nda-abcd-collection-3165

      Public
      This is the documentation repository for ongoing releases to the NDA collection 3165. Please add GitHub Issues here for requests or feedback.
      BSD 3-Clause "New" or "Revised" License
      •3•16•3•0•Updated Aug 27, 2024Aug 27, 2024

    • abcd_extract_eprime

      Public
      scripts that extract task timing and behavioral metrics
      MATLAB
      •0•5•0•0•Updated Jun 27, 2024Jun 27, 2024

    • abcd_docker

      Public
      Dockerfile for creating the ABCD docker image
      Shell
      •3•3•0•0•Updated Sep 4, 2023Sep 4, 2023

    • complete_row

      Public
      REDCap extension module: Colors each row of an instrument - if a value has been provided. This will highlight rows with missing values to improve their visibility.
      PHP
      •
      GNU General Public License v3.0
      •1•1•1•1•Updated Jun 2, 2023Jun 2, 2023

    • abcd-dicom2bids

      Public
      For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of spin echo field maps, and correcting the sidecar JSON files to meet BIDS Validator spec.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •20•9•8•0•Updated Mar 22, 2023Mar 22, 2023

    • pelham-weighting-resources

      Public
      Resources related to weighting of data in the ABCD Study.
      0•0•0•0•Updated Oct 17, 2022Oct 17, 2022

    • analysis-nda

      Public
      Collection of scripts to analyze ABCD release data
      nda17abcd-study
      R
      •36•44•8•0•Updated Sep 1, 2022Sep 1, 2022

    • nda-abcd-s3-downloader

      Public
      Tool for downloading ABCD_BIDS inputs and derivatives from the ABCD-BIDS NDA Collection 3165.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •21•10•2•0•Updated Jul 27, 2022Jul 27, 2022

    • qr-start-app

      Public
      Swift
      •0•0•0•0•Updated Feb 17, 2022Feb 17, 2022

    • auto-scoring

      Public
      Visual programming to calculate derived scores for REDCap
      JavaScript
      •0•3•0•0•Updated Dec 6, 2021Dec 6, 2021

    • MeaningfulAssociations_Dick_etal_2021

      Public
      This repository contains the statistic scripts (.R) for running the worked examples in the paper "Meaningful Associations in the Adolescent Brain Cognitive Development Study"
      R
      •0•3•0•0•Updated Jul 27, 2021Jul 27, 2021

    • FIONASITE

      Public
      Data upload site for FIONA site computer
      JavaScript
      •3•6•0•0•Updated Jun 23, 2021Jun 23, 2021

    • Tabulated-Data-Scripts

      Public
      Contains scripts (internal and external) for creating abcd_imgincl csv file
      Python
      •0•1•0•0•Updated Mar 5, 2021Mar 5, 2021

    • BPPCA_Neurocognition_Thompson_etal_2018

      Public
      The Structure of Cognition in 9 and 10 year-old Children and Associations with Problem Behaviors: Findings from the ABCD Study’s Baseline Neurocognitive Battery.
      R
      •2•5•0•1•Updated Jan 5, 2021Jan 5, 2021

    • redcap-to-nda

      Public
      Exporting REDCap data dictionaries and data to the NIMH National Data Archive (NDA)
      JavaScript
      •2•5•0•0•Updated Jul 14, 2020Jul 14, 2020

    • gfa_ses

      Public
      GFA for SES measures
      R
      •1•5•0•0•Updated May 2, 2020May 2, 2020

    • eprime-data-clean

      Public
      Convert E-Prime generated files (exported as csv) to propper CSV
      Python
      •3•0•0•0•Updated Feb 24, 2020Feb 24, 2020

    • abcd_acs_raked_propensity

      Public
      How to calculate raked propensity scores for the ABCD Study cohort
      R
      •4•11•0•0•Updated Feb 4, 2020Feb 4, 2020

    • fMRI-cleanup

      Public
      R
      •3•3•0•0•Updated Dec 2, 2019Dec 2, 2019

    • abcd-hcp-pipeline

      Public
      bids application for processing functional MRI data, robust to scanner, acquisition and age variability.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •19•5•0•0•Updated Sep 4, 2019Sep 4, 2019

    • family_history_problem_summary_scores

      Public
      R
      •0•0•0•0•Updated Jun 3, 2019Jun 3, 2019

    • asttt

      Public
      If this then that like framework for emails - great for studies with many users that all want to receive reports
      PHP
      •0•0•0•0•Updated Feb 8, 2019Feb 8, 2019

    • fitbit-pipeline

      Public
      Contains processing, direct alert generation, and scoring logic for ABCD Fitbit data
      Python
      •1•4•0•0•Updated Feb 7, 2019Feb 7, 2019

    • geocoding

      Public
      A framework for adding gelocation derived data to the ABCD study.
      R
      •
      MIT License
      •5•4•1•0•Updated Jan 30, 2019Jan 30, 2019

    • abcd-ident

      Public
      iPhone application to help identify participants for onsite visits
      Swift
      •0•0•0•0•Updated Jan 7, 2019Jan 7, 2019

    • abcd-dev

      Public
      A basic ABCD development environment running ubuntu, apache2 and php7
      0•1•0•0•Updated Dec 12, 2018Dec 12, 2018

    • visit-structure

      Public
      Graphical visualization of the visit structure in a longitudinal project
      JavaScript
      •0•0•0•0•Updated Dec 12, 2018Dec 12, 2018

    • ABCDWorkshop-reproducible-science

      Public
      Material collection for the ABCD-DAIC workshops on data science
      JavaScript
      •
      Other
      •1•3•0•0•Updated Oct 4, 2018Oct 4, 2018