models: add new clinical data models, #189

opencb · Aug 31, 2020 · bbb9fca · bbb9fca
1 parent 004b33a
commit bbb9fca
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diff --git a/biodata-models/src/main/java/org/opencb/biodata/models/clinical/ClinicalAnalyst.java b/biodata-models/src/main/java/org/opencb/biodata/models/clinical/ClinicalAnalyst.java
@@ -0,0 +1,76 @@
+package org.opencb.biodata.models.clinical;
+
+import java.util.List;
+
+public class ClinicalAnalyst {
+    private String id;
+    private String name;
+    private String email;
+    private String assignedBy;
+    private String date;
+
+    public ClinicalAnalyst(String id, String name, String email, String assignedBy, String date) {
+        this.id = id;
+        this.name = name;
+        this.email = email;
+        this.assignedBy = assignedBy;
+        this.date = date;
+    }
+
+    @Override
+    public String toString() {
+        final StringBuilder sb = new StringBuilder("ClinicalAnalyst{");
+        sb.append("id='").append(id).append('\'');
+        sb.append(", name='").append(name).append('\'');
+        sb.append(", email='").append(email).append('\'');
+        sb.append(", assignedBy='").append(assignedBy).append('\'');
+        sb.append(", date='").append(date).append('\'');
+        sb.append('}');
+        return sb.toString();
+    }
+
+    public String getId() {
+        return id;
+    }
+
+    public ClinicalAnalyst setId(String id) {
+        this.id = id;
+        return this;
+    }
+
+    public String getName() {
+        return name;
+    }
+
+    public ClinicalAnalyst setName(String name) {
+        this.name = name;
+        return this;
+    }
+
+    public String getEmail() {
+        return email;
+    }
+
+    public ClinicalAnalyst setEmail(String email) {
+        this.email = email;
+        return this;
+    }
+
+    public String getAssignedBy() {
+        return assignedBy;
+    }
+
+    public ClinicalAnalyst setAssignedBy(String assignedBy) {
+        this.assignedBy = assignedBy;
+        return this;
+    }
+
+    public String getDate() {
+        return date;
+    }
+
+    public ClinicalAnalyst setDate(String date) {
+        this.date = date;
+        return this;
+    }
+}
diff --git a/biodata-models/src/main/java/org/opencb/biodata/models/clinical/ClinicalAudit.java b/biodata-models/src/main/java/org/opencb/biodata/models/clinical/ClinicalAudit.java
@@ -0,0 +1,72 @@
+package org.opencb.biodata.models.clinical;
+
+public class ClinicalAudit {
+    private String author;
+    private Action action; {
+
+    }
+    private String message;
+    private String date;
+
+
+    public enum Action {
+        CREATE_CLINICAL_ANALYSIS,
+        CREATE_INTERPRETATION,
+        UPDATE_CLINICAL_ANALYSIS,
+        UPDTATE_INTERPRETATION
+    }
+
+    public ClinicalAudit(String author, Action action, String message, String date) {
+        this.author = author;
+        this.action = action;
+        this.message = message;
+        this.date = date;
+    }
+
+    @Override
+    public String toString() {
+        final StringBuilder sb = new StringBuilder("ClinicalAudit{");
+        sb.append("author='").append(author).append('\'');
+        sb.append(", action=").append(action);
+        sb.append(", message='").append(message).append('\'');
+        sb.append(", date='").append(date).append('\'');
+        sb.append('}');
+        return sb.toString();
+    }
+
+    public String getAuthor() {
+        return author;
+    }
+
+    public ClinicalAudit setAuthor(String author) {
+        this.author = author;
+        return this;
+    }
+
+    public Action getAction() {
+        return action;
+    }
+
+    public ClinicalAudit setAction(Action action) {
+        this.action = action;
+        return this;
+    }
+
+    public String getMessage() {
+        return message;
+    }
+
+    public ClinicalAudit setMessage(String message) {
+        this.message = message;
+        return this;
+    }
+
+    public String getDate() {
+        return date;
+    }
+
+    public ClinicalAudit setDate(String date) {
+        this.date = date;
+        return this;
+    }
+}
diff --git a/biodata-models/src/main/java/org/opencb/biodata/models/clinical/ClinicalComment.java b/biodata-models/src/main/java/org/opencb/biodata/models/clinical/ClinicalComment.java
@@ -0,0 +1,54 @@
+package org.opencb.biodata.models.clinical;
+
+import java.util.ArrayList;
+import java.util.List;
+
+public class ClinicalComment {
+    private String author;
+    private String message;
+    private List<String> tags;
+    private String date;
+
+    public ClinicalComment(String author, String message, List<String> tags, String date) {
+        this.author = author;
+        this.message = message;
+        this.tags = tags;
+        this.date = date;
+    }
+
+    public String getAuthor() {
+        return author;
+    }
+
+    public ClinicalComment setAuthor(String author) {
+        this.author = author;
+        return this;
+    }
+
+    public String getMessage() {
+        return message;
+    }
+
+    public ClinicalComment setMessage(String message) {
+        this.message = message;
+        return this;
+    }
+
+    public List<String> getTags() {
+        return tags;
+    }
+
+    public ClinicalComment setTags(List<String> tags) {
+        this.tags = tags;
+        return this;
+    }
+
+    public String getDate() {
+        return date;
+    }
+
+    public ClinicalComment setDate(String date) {
+        this.date = date;
+        return this;
+    }
+}