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9 Open 13 Closed
9 Open 13 Closed
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Issues list

BUG: Not masking terminals?
#35 opened Feb 28, 2022 by corneliusroemer
Filter out env samples enhancement New feature or request
#34 opened Nov 23, 2021 by corneliusroemer
Use prealignment from ncov-ingest, save computation time enhancement New feature or request
#23 opened Nov 5, 2021 by corneliusroemer
@corneliusroemer
5
Give samples with quick sampling->submission a relaxed upper clock filter limit, tighten upper limit otherwise enhancement New feature or request
#22 opened Nov 4, 2021 by corneliusroemer
Private mutation counts are very high ~30 for regional lineages in countries that don't submit to Genbank blocked Need upstream changes
#20 opened Nov 3, 2021 by corneliusroemer
Add clock_deviation, rare mutations and other QC as colorings to help tune diagnostic.py cutoffs enhancement New feature or request
#18 opened Nov 3, 2021 by corneliusroemer
@corneliusroemer
Switch off prioritisation for continents/global but keep for countries enhancement New feature or request
#17 opened Nov 3, 2021 by corneliusroemer
@corneliusroemer
Build tree with only pango designated sequences for Nextclade pango assignments enhancement New feature or request
#14 opened Nov 3, 2021 by corneliusroemer
1
@corneliusroemer
Why is nuc:7851T (AY.4 defining) such a mess on the Europe tree? bug Something isn't working invalid This doesn't seem right
#13 opened Nov 2, 2021 by corneliusroemer
@corneliusroemer
3
ProTip! What’s not been updated in a month: updated:<2024-12-12.