Skip to content
@monarch-initiative

Monarch Initiative

Cross-species disease discovery and diagnosis

Pinned Loading

  1. mondo mondo Public template

    Mondo Disease Ontology

    Jupyter Notebook 239 54

  2. koza koza Public

    Data transformation framework for LinkML data models

    Python 48 4

  3. MAxO MAxO Public

    Medical action ontology

    HTML 53 4

  4. helpdesk helpdesk Public

    The Monarch Initiative Helpdesk

    7

  5. monarch-ingest monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    Python 15 2

  6. monarch-app monarch-app Public

    Monarch Initiative website and API

    Python 19 6

Repositories

Showing 10 of 241 repositories
  • mondo Public template

    Mondo Disease Ontology

    monarch-initiative/mondo’s past year of commit activity
    Jupyter Notebook 239 CC-BY-4.0 54 427 (2 issues need help) 43 Updated Jan 15, 2025
  • monarch-qc Public

    WORK IN PROGRESS - new effort at implementing a QC Dashboard for the Monarch KG and Ingest

    monarch-initiative/monarch-qc’s past year of commit activity
    TypeScript 1 MIT 1 17 0 Updated Jan 15, 2025
  • QC Public
    monarch-initiative/QC’s past year of commit activity
    Makefile 1 1 1 12 Updated Jan 15, 2025
  • gpsea Public

    A Python library for discovery of genotype-phenotype associations

    monarch-initiative/gpsea’s past year of commit activity
    Python 5 MIT 1 16 0 Updated Jan 15, 2025
  • monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    monarch-initiative/monarch-ingest’s past year of commit activity
    Python 15 2 32 3 Updated Jan 15, 2025
  • closurizer Public

    Add closure expansion fields to kgx files following the Golr pattern

    monarch-initiative/closurizer’s past year of commit activity
    Python 4 0 1 0 Updated Jan 15, 2025
  • mondo-ingest Public

    Coordinating the mondo-ingest with external sources

    monarch-initiative/mondo-ingest’s past year of commit activity
    Jupyter Notebook 6 3 230 (1 issue needs help) 18 Updated Jan 15, 2025
  • zfin-genotype-to-phenotype-ingest Public
    monarch-initiative/zfin-genotype-to-phenotype-ingest’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 15, 2025
  • monarch-app Public

    Monarch Initiative website and API

    monarch-initiative/monarch-app’s past year of commit activity
    Python 19 BSD-3-Clause 6 191 (3 issues need help) 10 Updated Jan 14, 2025
  • phenomics-assistant Public

    LLM retrieval augmented generation agent for the Monarch Knowledge graph.

    monarch-initiative/phenomics-assistant’s past year of commit activity
    Python 20 MIT 0 3 0 Updated Jan 14, 2025
View all repositories

Most used topics

Loading…