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44 Open 32 Closed
44 Open 32 Closed
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Issues list

error raised while reading key '/layers' of type <class 'h5py._hl.group.Group' when converting h5ad to seurat object
#93 opened Aug 22, 2024 by pandaqiuqiu
When encountering a NumPy-related error while using a conversion function on an Seurat object
#91 opened Jun 24, 2024 by liuzhuoliang123
2
Question regarding conversion time from AnnData to Seurat object
#90 opened May 16, 2024 by qianzach
Non-existent Function Documentation
#89 opened May 9, 2024 by DarioS
I wonder that the h5ad file convert from Seurat, if it was read in scapy, where is the raw dada?
#88 opened Apr 3, 2024 by BioinfoXP
1
Converting Xenium object from R
#87 opened Mar 12, 2024 by man154
Failure to convert h5ad to Rds
#86 opened Feb 28, 2024 by RookieA1
4
failure to convert attributeError: 'dict' object has no attribute 'dtype'
#85 opened Feb 6, 2024 by Flu09
1
Failure to convert SingleCellExperiment (trajectory analysis object) to h5ad
#83 opened Dec 27, 2023 by Yanst86
no slot of name "meta.features" for this object of class "Assay5"
#82 opened Dec 21, 2023 by Rohit-Satyam
1
convertFormat function do not support v5
#81 opened Dec 8, 2023 by ixxmu
No module named 'numpy.core._multiarray_umath'
#80 opened Sep 14, 2023 by chrarnold
Not possible to install from conda package
#79 opened Sep 12, 2023 by stevekm
1
Convert h5ad file to seurat file
#78 opened Aug 29, 2023 by sanderslhc
11
h5ad to Seurat conversion "AttributeError: 'dict' object has no attribute 'dtype'"
#77 opened Jul 20, 2023 by jestlin15
2
Seurat Assay5
#76 opened Jul 18, 2023 by ValYianni
5
negative length vectors are not allowed : Error when converting anndata to seurat
#75 opened Jul 14, 2023 by bapoorva
1
Export feature loadings in anndata2seurat
#74 opened Jun 22, 2023 by Zepeng-Mu
Hello everyone, I am having issues running sceasy for conversion from sce object to anndata. Following repo instructions, I run:
#72 opened May 23, 2023 by Pancreaticpathway
2
Spatial data
#71 opened May 10, 2023 by AndrewSkelton
2
memory issues trying to convert from anndata to Seurat
#70 opened Apr 26, 2023 by massisnascimento
seurat to anndata formatting adata.X as CSC sparse resulting in inefficient handling
#69 opened Jan 19, 2023 by dpcook
Evaluation error: Unable to convert R object to Python type
#68 opened Dec 19, 2022 by Christ14n97
Problems setting up the proper environment
#67 opened Dec 15, 2022 by mariapozo
1
RStudio crashing with convertFormat - Anndata to Seurat
#66 opened Nov 30, 2022 by sarakn97
1
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