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memory issues trying to convert from anndata to Seurat #70

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massisnascimento opened this issue Apr 26, 2023 · 0 comments
Open

memory issues trying to convert from anndata to Seurat #70

massisnascimento opened this issue Apr 26, 2023 · 0 comments

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@massisnascimento
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Hi, I am trying to convert a relatively large anndata file (33.8GB) to Seurat. However my RStudio session crashes before the conversion is done. I can see the memory usage going up all the way to use all available RAM (243GB) before crashing, with no temporary files being written in the meantime. Is this normal?
@massisnascimento massisnascimento changed the title memory issues trying to covert from anndata to Seurat memory issues trying to convert from anndata to Seurat Apr 26, 2023
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@massisnascimento