fix

cbg-ethz · Jul 21, 2023 · 4cc042e · 4cc042e
1 parent adcfd72
commit 4cc042e
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/...ces/auxiliary_workflows/benchmark/resources/method_definitions/shorah_default_amplicon.py b/...ces/auxiliary_workflows/benchmark/resources/method_definitions/shorah_default_amplicon.py
@@ -12,13 +12,13 @@
 def main(fname_bam, fname_reference, fname_result, fname_result_haplos, dname_work,seq_tech, genome_size,read_length):
     dname_work.mkdir(parents=True, exist_ok=True)
 
-    if (read_length > genome_size) & seq_tech == 'illumina':
+    if (read_length > genome_size) & (seq_tech == 'illumina'):
         open(fname_result_haplos, 'a').close()
         # create empty vcf files
         f = open(fname_result, 'a')
         f.write("#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO")
         f.close()
-        
+
     else:
 
         subprocess.run(