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51 Open 65 Closed
51 Open 65 Closed
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Issues list

[CI] Slurm e2e Failing bug Issues noting problems and PRs fixing those problems.
#180 opened Oct 14, 2024 by asmacdo
@tientong98
1
bab-init tries to datalad get a subject from input dataset that's NOT on subject list bug Issues noting problems and PRs fixing those problems.
#177 opened Sep 17, 2024 by audreycluo
2
babs requires all zips in original input dataset to be downloaded before doing babs-init enhancement New feature or request
#176 opened Sep 17, 2024 by audreycluo
Support SLURM array jobs in babs-submit enhancement New feature or request
#175 opened Jul 2, 2024 by tsalo
@tientong98
5
Allow babs-init to create the container dataset enhancement New feature or request
#174 opened Jul 2, 2024 by tsalo
Consolidate --where-project and --project-name in babs-init breaking-change PRs that change results or interfaces. enhancement New feature or request
#173 opened Jul 2, 2024 by tsalo
Convert --project-root parameter in CLIs to positional argument breaking-change PRs that change results or interfaces. enhancement New feature or request
#172 opened Jul 2, 2024 by tsalo
[ENH] Add workflow for processing and adding new subjects to BABS results enhancement New feature or request
#171 opened Mar 5, 2024 by mattcieslak
Make e2e testing run on PRs as well as e.g. weekly enhancement New feature or request
#170 opened Mar 5, 2024 by yarikoptic
Add user-configurable environment variable passthrough enhancement New feature or request
#167 opened Jan 8, 2024 by asmacdo
All templated bash scripts should be "robust" and shellcheck-clean bug Issues noting problems and PRs fixing those problems.
#166 opened Jan 4, 2024 by yarikoptic
[DOCS] update paper citation
#163 opened Dec 14, 2023 by zhao-cy
@mattcieslak
Make parsing of output more robust
#160 opened Dec 8, 2023 by yarikoptic
[FIX] git commit --amenderror when babs-init: need to add --allow-empty?
#156 opened Nov 15, 2023 by zhao-cy
1
2
[DOCS] docs enhancements from Austin documentation Improvements or additions to documentation
#154 opened Nov 3, 2023 by zhao-cy
2
[DOCS] update example walkthrough: to use $TMP" for CUBIC cluster
#153 opened Nov 1, 2023 by zhao-cy
Change permissions on NFS4 ACL filesystems in order to remove git annex files
#141 opened Sep 28, 2023 by Michael-Sun
1
FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. enhancement New feature or request
#140 opened Sep 27, 2023 by Michael-Sun
4
UnicodeEncodeError: 'latin-1' codec can't encode character '\u2713' in position 0: ordinal not in range(256) documentation Improvements or additions to documentation
#139 opened Sep 27, 2023 by Michael-Sun
@zhao-cy
1
[FIX] path generated by BABS is too long for freesurfer to function/run properly documentation Improvements or additions to documentation enhancement New feature or request
#138 opened Aug 24, 2023 by yibeichan
15
[DOCS] (NMIND gold) Continuous integration badges in README for coverage
#127 opened Jul 25, 2023 by zhao-cy
1
1
Test out: XCP-D when FreeSurfer derivatives are needed (i.e., –cifti and --warp-surfaces-native2std)
#123 opened Jul 24, 2023 by zhao-cy
installation error on Hanke group local cluster
#122 opened Jul 24, 2023 by zhao-cy
[DOCS] minor enhancements in docs after Sydney's review documentation Improvements or additions to documentation
#115 opened Jul 12, 2023 by zhao-cy
1 of 5 tasks
manuscript ready
[tests] infrastructure for automatic pytest of babs-submit and babs-status
#113 opened Jul 10, 2023 by zhao-cy Enhancements and features on the roadmap
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