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Tools: miscellaneous recommendations
Tessa Pierce edited this page Jan 12, 2016
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- tool is free
- tool is open-source
- tool is not free, but boasts remarkably better performance than free options
When possible, we will work recommendations directly into the resource topics in the sidebar, but for info-rich presentations, please see below.
Tristan Carland's Presentation from Jan 11, 2016 (linked here)
- packed with goodies for phylogenetics, variant analysis, graphics, project management!
- Meeting Schedule and Speakers
- UCSD Bioinformatics courses
- Workshops
-
The BUG project
- Meetup schedule
- How to write tutorials
- How to write topic wikipages
- Logo competition!
- Markdown documents
- Digital notebooks - jupyter (ipython)
- Languages: coding basics
- General computing
- Data management
- Bioinformatics wrapper pkgs
- Data Quality check, trimming, filtering
- Clustering methods and visualization
- Visualization methods