bioinfx

bioinformatics scripts and tools by the Microbiology and Infection Unit at the University of Warwick

Disclamier - scripts may be sourced from the web. If you see your work here and would like credit for it, get in touch.

Name		Name	Last commit message	Last commit date
Latest commit History 47 Commits
ACTgenerator.sh		ACTgenerator.sh
GBKExtractFeature.py		GBKExtractFeature.py
Genbank_slicer.py		Genbank_slicer.py
LICENSE		LICENSE
NCBIdatabaseQuery.pl		NCBIdatabaseQuery.pl
README.md		README.md
SSCalc.py		SSCalc.py
Shannon.py		Shannon.py
align_and_remap.sh		align_and_remap.sh
blastfilterer.py		blastfilterer.py
coregeneparser.py		coregeneparser.py
deinterleave_fastq.sh		deinterleave_fastq.sh
extractNAfeatures.py		extractNAfeatures.py
extract_fasta.pl		extract_fasta.pl
extractfeatures.py		extractfeatures.py
fasta_extractor.pl		fasta_extractor.pl
fastafetcher.py		fastafetcher.py
find_by_list.sh		find_by_list.sh
gc_sliding_window.py		gc_sliding_window.py
getpdb.sh		getpdb.sh
index_fasta.pl		index_fasta.pl
parse_16S_from_gbk.pl		parse_16S_from_gbk.pl
parse_region_from_genome.pl		parse_region_from_genome.pl
plot_trees.R		plot_trees.R
print_fasta_headers.pl		print_fasta_headers.pl
sort_by_list.sh		sort_by_list.sh
sortandmatch.sh		sortandmatch.sh
split_multifasta.pl		split_multifasta.pl
splitmultigenbank.py		splitmultigenbank.py
strucfit.py		strucfit.py
tabulateHHpred.py		tabulateHHpred.py
treetips.py		treetips.py
uniqueBLAST.py		uniqueBLAST.py
x2y.pl		x2y.pl

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