[Feat] Port HazReg.jl

Project.toml

@@ -5,14 +5,30 @@ version = "0.1.0"
 
 [deps]
 DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
+Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
+ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
+LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
+LogExpFunctions = "2ab3a3ac-af41-5b50-aa03-7779005ae688"
+Optim = "429524aa-4258-5aef-a3af-852621145aeb"
+Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
+SpecialFunctions = "276daf66-3868-5448-9aa4-cd146d93841b"
 StatsAPI = "82ae8749-77ed-4fe6-ae5f-f523153014b0"
 StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
 StatsModels = "3eaba693-59b7-5ba5-a881-562e759f1c8d"
 SurvivalBase = "9cb6079b-e021-4662-8a75-9f65bfa286f2"
+SurvivalDistributions = "7121986e-ae89-4673-ae4e-1cb822919a18"
 
 [compat]
 Aqua = "0.8"
 DataFrames = "1"
+Distributions = "0.25"
+LinearAlgebra = "1"
+LogExpFunctions = "0.3"
+Optim = "1"
+RDatasets = "0.7"
+Random = "1.6"
+SpecialFunctions = "2"
+StableRNGs = "1"
 StatsAPI = "1"
 StatsBase = "0.34"
 StatsModels = "0.7"
@@ -23,8 +39,11 @@ julia = "1.6.7"
 
 [extras]
 Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595"
+RDatasets = "ce6b1742-4840-55fa-b093-852dadbb1d8b"
+Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
+StableRNGs = "860ef19b-820b-49d6-a774-d7a799459cd3"
 Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 TestItemRunner = "f8b46487-2199-4994-9208-9a1283c18c0a"
 
 [targets]
-test = ["Aqua", "Test", "TestItemRunner"]
+test = ["Aqua", "RDatasets", "Random", "Test", "TestItemRunner", "StableRNGs"]

docs/Project.toml

@@ -1,3 +1,5 @@
 [deps]
 Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
+DocumenterCitations = "daee34ce-89f3-4625-b898-19384cb65244"
+LiveServer = "16fef848-5104-11e9-1b77-fb7a48bbb589"
 SurvivalModels = "230d35e3-bb2c-48f4-adfc-0b42c4b39395"

docs/make.jl

@@ -1,10 +1,18 @@
 using SurvivalModels
 using Documenter
+using DocumenterCitations
 
 DocMeta.setdocmeta!(SurvivalModels, :DocTestSetup, :(using SurvivalModels); recursive=true)
 
+bib = CitationBibliography(
+    joinpath(@__DIR__,"src","assets","references.bib"),
+    style=:numeric
+)
+
+
 makedocs(;
     modules=[SurvivalModels],
+    plugins=[bib],
     authors="Oskar Laverny <[email protected]> and contributors",
     sitename="SurvivalModels.jl",
     format=Documenter.HTML(;
@@ -14,6 +22,8 @@ makedocs(;
     ),
     pages=[
         "Home" => "index.md",
+        "GeneralHazard.md",
+        "references.md",
     ],
 )