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dropping columns that have only one sequence in it can fail at the N-terminus.
#331
opened Aug 9, 2024 by
danielhhaft
clarification: why is phmmer/jackhmmer better than blastp/psi-blast?
#327
opened Jul 14, 2024 by
JLSteenwyk
Feature request: Limit the MSA depth in Jackhmmer/Nhmmer/Phmmer/Hmmsearch
#323
opened Apr 10, 2024 by
Augustin-Zidek
Very long gap in an alignment, due to extreme mononlucleotide repeat in profile
H4
In HMMER4 development
wontfix
#201
opened Jul 23, 2020 by
traviswheeler
H4 Daemon uses hack to detect type of data file
H4
In HMMER4 development
#122
opened Jan 26, 2017 by
npcarter
HMMER can't read data files that were written on a machine of opposite endianness
H4
In HMMER4 development
#121
opened Jan 26, 2017 by
npcarter
HMMER4 doesn't handle POWER architecture when booted in big-endian mode
H4
In HMMER4 development
#120
opened Jan 26, 2017 by
npcarter
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