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Releases: DessimozLab/pyham

v1.2.0

19 Mar 15:50
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FIX:
- Remove unnecessary files from git repo
- replace outdated nosetests -> pytest as test running

IMPROVEMENTS:
- Improve handling of HOG IDs in pyham. HOG objects use "hog_id" or "og" attribute
from orthoxml to show objects, and also include the taxonomic range.
- LOFT attribute will be loaded for gene elements if assigned in orthoxml.

Full Changelog: v1.1.11...v1.2.0

Release v1.1.11

16 Nov 16:56
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What's Changed

  • added quoted_node_names option to taxonomy class to fix newick import error by @ethanbass
  • Fixes parsing problem with directly nested paralogGroup nodes in orthoxml by @alpae

New Contributors

Release 1.1.10

22 Apr 07:37
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v1.1.10

v 1.1.10

1.1.6

16 Nov 14:08
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v1.1.6

1.1.5

02 Nov 21:52
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v1.1.5

1.1.3

04 Sep 19:32
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version 1.1.3

1.1.1

31 Aug 13:30
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remove iHAM oma links\

PhyloXML compatibility and VisTool Enhancements

28 Aug 23:25
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1.0.8

02 Jun 16:02
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v1.0.7 fix .6 fix type

1.0.7

02 Jun 15:28
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version 1.0.3