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Remove dependency on openslide-python #118

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@jmsmkn jmsmkn commented Jan 23, 2025

Instead use the version that comes bundled with vips.

See https://github.com/DIAGNijmegen/rse-grand-challenge-admin/issues/426

@jmsmkn jmsmkn requested a review from pkcakeout January 23, 2025 12:12
@jmsmkn jmsmkn changed the title Remove dependency on openslide Remove dependency on openslide-python Jan 23, 2025
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jmsmkn commented Jan 23, 2025

One thing I'm worried about is that the test times are now much longer using the process pools, less than 2s before to now 42s.

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jmsmkn commented Jan 23, 2025

This shouldn't be merged - there isn't a test to check that _extract_openslide_properties is actually doing anything! So, I cannot be sure that this has been altered with any confidence.

@jmsmkn jmsmkn closed this Jan 23, 2025
@jmsmkn jmsmkn deleted the test_system_openslide branch January 23, 2025 15:05
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less than 2s before to now 42s.

Wow. This increase is definitely not what I experienced. It was worse, but only slightly at maybe took in total 1 second longer only...

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