updating 'format_protein_list_to_string' util function returns protei… #49

	# This workflow will install Python dependencies, run tests and lint with a single version of Python
	# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python

	name: Pytest (TDD)

	on:
	push:
	branches: [ "main" ]
	pull_request:
	branches: [ "main", "dev" ]

	permissions:
	contents: read

	jobs:
	build:

	runs-on: ubuntu-latest

	steps:
	- uses: actions/checkout@v3
	- name: Set up Python 3.9
	uses: actions/setup-python@v3
	with:
	python-version: "3.9"
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install pytest
	pip install pyopenms
	pip install psims
	pip install -e .
	- name: Unzip system test file
	run: \|
	unzip tests/system/v1_to_v2/test_files/mzxml.zip -d tests/system/v1_to_v2/test_files/
	- name: Test with pytest
	run: \|
	pytest tests/ -W ignore::SyntaxWarning -s

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