This repository contains scripts used to scaffold fire ant PacBio assembly to chromosome level as described in Methods section of:
Priyam et al. (in review) Parameter exploration improves the accuracy of long-read genome assembly.
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Scripts to use RADseq, RNAseq, and BioNano data with ALLMAPS for chromosomal scaffolding of genome assemblies.
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wurmlab/to_allmaps
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Scripts to use RADseq, RNAseq, and BioNano data with ALLMAPS for chromosomal scaffolding of genome assemblies.
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