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Fix citation.
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willgryan committed Sep 29, 2023
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Expand Up @@ -50,7 +50,7 @@ PAVER uses vector embeddings to help interpret pathway analyses. Embeddings enco

![PAVER uses numerical representations of pathways to find functionally related clusters.\label{fig:overview}](figures/overview.png)

PAVER was designed to be easy to use by researchers and students with minimal coding experience. PAVER has already been using in a number of scientific publications to aid in the intepretation of pathway analyses [@william_ryan_2023_8156248, @RN78]. We have pre-computed vector representations for Gene Ontology using the recent anc2vec model [@RN13], available here: https://github.com/willgryan/PAVER_embeddings. However, embeddings for any pathway database can be used with PAVER.
PAVER was designed to be easy to use by researchers and students with minimal coding experience. PAVER has already been using in a number of scientific publications to aid in the intepretation of pathway analyses [@william_ryan_2023_8156248; @RN78]. We have pre-computed vector representations for Gene Ontology using the recent anc2vec model [@RN13], available here: https://github.com/willgryan/PAVER_embeddings. However, embeddings for any pathway database can be used with PAVER.

# Licensing and Availability

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