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@wells-wood-research

Wells Wood Research Group

Software developed by the Wells Wood Research Group, University of Edinburgh

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  1. BAlaS BAlaS Public

    Source code for the BUDE Alanine Scan web application.

    Elm 9 3

  2. ampal ampal Public

    Forked from isambard-uob/ampal

    A simple, intuitive and Pythonic framework for representing biomolecular structure.

    Python

  3. ccbuilder2 ccbuilder2 Public

    Forked from woolfson-group/ccbuilder2

    A web application for atomistic modelling of coiled coils and collagens.

    Elm

  4. isambard isambard Public

    Forked from isambard-uob/isambard

    Intelligent System for Analysis, Model Building And Rational Design of biomolecules.

    Python 1

  5. de-stress de-stress Public

    DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.

    C++ 18 1

  6. PDBench PDBench Public

    PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.

    Python 27

Repositories

Showing 10 of 24 repositories
  • chronowska-stam-wood-2024-protein-design-archive Public

    Code supporting the Protein Design Archive (PDA) database publication

    wells-wood-research/chronowska-stam-wood-2024-protein-design-archive’s past year of commit activity
    Jupyter Notebook 2 MIT 0 0 0 Updated Nov 12, 2024
  • wells-wood-research.github.io Public

    Group website.

    wells-wood-research/wells-wood-research.github.io’s past year of commit activity
    Elm 0 0 0 7 Updated Nov 12, 2024
  • drFrankenstein Public

    Fast Parameterisation of Complex Molecules for the AMBER forcefield

    wells-wood-research/drFrankenstein’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Nov 6, 2024
  • isambard Public Forked from isambard-uob/isambard

    Intelligent System for Analysis, Model Building And Rational Design of biomolecules.

    wells-wood-research/isambard’s past year of commit activity
    Python 1 MIT 7 0 0 Updated Nov 5, 2024
  • drMD Public

    Molecular Dynamics for Experimentalists

    wells-wood-research/drMD’s past year of commit activity
    Python 9 MIT 1 0 0 Updated Oct 30, 2024
  • ampal Public Forked from isambard-uob/ampal

    A simple, intuitive and Pythonic framework for representing biomolecular structure.

    wells-wood-research/ampal’s past year of commit activity
    Python 0 MIT 4 0 0 Updated Oct 26, 2024
  • timed-design Public

    Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis

    wells-wood-research/timed-design’s past year of commit activity
    Python 50 11 8 1 Updated Oct 24, 2024
  • de-stress Public

    DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.

    wells-wood-research/de-stress’s past year of commit activity
    C++ 18 1 10 8 Updated Jul 25, 2024
  • aposteriori Public

    DNN based protein design.

    wells-wood-research/aposteriori’s past year of commit activity
    Python 7 MIT 2 4 1 Updated Jul 15, 2024
  • wells-wood-research/TTSCP_L102C_DSB-MBnThz-vs-TTSCP_L102C_DDSB-MBnThz’s past year of commit activity
    Python 1 0 0 0 Updated May 2, 2024

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