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move parameter tables to CSV and read into MD #262

move parameter tables to CSV and read into MD

move parameter tables to CSV and read into MD #262

Workflow file for this run

name: CI
on:
pull_request:
push:
branches:
- develop
jobs:
pre-commit:
runs-on: ubuntu-20.04
steps:
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
- uses: pre-commit/[email protected]
build:
runs-on: ubuntu-20.04
strategy:
matrix:
w90-binary-parallel: ["false", "true"]
name: Build and test `parallel=${{ matrix.w90-binary-parallel }}`
steps:
- name: checkout
uses: actions/checkout@v2
- name: setup python
uses: actions/setup-python@v2
with:
python-version: 3.6
- name: install dependencies
run: |
sudo apt-get update
sudo apt-get -y install \
gfortran \
libblas-dev \
liblapack-dev \
openmpi-bin \
libopenmpi-dev
pip install --upgrade pip
pip install \
numpy \
matplotlib \
- name: build
env:
W90BINARYPARALLEL: ${{ matrix.w90-binary-parallel }}
run: |
if [ "$W90BINARYPARALLEL" == "true" ] ; then
cp ./.github/workflows/config/make.inc.gfort+openmpi ./make.inc
else
cp ./.github/workflows/config/make.inc.gfort ./make.inc
fi
#make -j default w90chk2chk libs
make all
- name: run tests
env:
W90BINARYPARALLEL: ${{ matrix.w90-binary-parallel }}
run: |
./.github/workflows/run_tests.sh
- name: compute coverage
uses: codecov/codecov-action@v1
- name: archive test results
if: ${{ always() }}
uses: actions/upload-artifact@v2
with:
name: test-results_parallel=${{ matrix.w90-binary-parallel }}
path: |
test-suite/tests/test*/test.err*
test-suite/tests/test*/test.out*
docs:
name: Validate mkdocs links
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
# use the latest stable version
python-version: "3.x"
cache: "pip"
# `pybtex` uses `pkg_resources` which is deprecated. Use workaround until upstream `mkdocs_bibtext`decides on a solution
# https://github.com/shyamd/mkdocs-bibtex/issues/228
# https://bitbucket.org/pybtex-devs/pybtex/issues/169/replace-pkg_resources-with
- run: pip install -r docs/requirements.txt setuptools
- run: mkdocs build --strict
working-directory: ./docs
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
ENABLE_MKDOCS_GIT_COMMITTERS: False