Clamp down expected outputs.

benchmarks/benchmark1.ipynb

@@ -1001,13 +1001,57 @@
    "cell_type": "markdown",
    "metadata": {},
    "source": [
-    "## Results"
+    "## Submission Guidelines\n",
+    "\n",
+    "Please follow these [upload instructions](https://github.com/usnistgov/pfhub/blob/master/upload.md).\n",
+    "\n",
+    "In addition to that specified, further data to upload can include a Youtube video, images of the nuclei at different times, or the entire phase field variable at different times. This data can be uploaded directly to the website or stored at a secondary location and only the link to the data provided. This data is not required, but will help others view your work.\n",
+    "\n",
+    "### Part (a)\n",
+    "\n",
+    "Part (a) requires running the simulation to equilibrium, and the following data should be collected.\n",
+    "\n",
+    "- The free energy integrated over the whole domain, $\\mathcal{F}$, at each timestep. \n",
+    "\n",
+    "  One PFHub upload is required for all the simulations. The free energy data should be recorded in a file named needs to be `free_energy_1a.csv`. This CSV file (comma-separated value) must have the following format: note the column headings and lack of spaces.\n",
+    "\n",
+    "  ```\n",
+    "  time,free_energy\n",
+    "  0.00000000,319.0337102\n",
+    "  5.00000000,318.8273928\n",
+    "  ...\n",
+    "  10000.0000,40.81065093\n",
+    "  ...\n",
+    "  ```\n",
+    " \n",
+    "- The phase field, $c$, at each grid point in the domain at the following times (aspirational):\n",
+    "  - 1,000\n",
+    "  - 10,000\n",
+    "  - 100,000\n",
+    "  - 1,000,000\n",
+    "\n",
+    "  You may provide this data in whatever format you consider \"most useful,\" and we shall endeavour to deal with that, e.g. a checkpoint file in the format native to your phase-field simulation framework.\n",
+    "  Optionally, please consider also uploading a VTK ImageData file. If your mesh is unstructured or irregular, this will require appropriate interpolation prior to export. This can be accomplished in ParaView using the PointVolumeInterpolator filter.<sup>&#8225;</sup>\n",
+    "\n",
+    "  The names of these data files should encode the time and problem, e.g.,\n",
+    "  `raw_data_1a.0001000.vti`,\n",
+    "  `raw_data_1a.0010000.vti`,\n",
+    "  `raw_data_1a.0100000.vti`, and\n",
+    "  `raw_data_1a.1000000.vti`.\n",
+    "\n",
+    "### Parts (b) through (d)\n",
+    "\n",
+    "The same data as in Part (a) are required; please follow the same instructions, modifying \"1a\" with the appropriate letter (\"1b\", \"1c\", etc.).\n",
+    "\n",
+    "<sup>&#8225;</sup>: Any mention of commercial products within NIST web pages is for information only; it does not imply recommendation or endorsement by NIST."
    ]
   },
   {
    "cell_type": "markdown",
    "metadata": {},
    "source": [
+    "## Results\n",
+    "\n",
     "Results from this benchmark problem are displayed on the [simulation result page]({{ site.baseurl }}/simulations) for different codes."
    ]
   },
@@ -1019,21 +1063,12 @@
     "\n",
     "Feedback on this benchmark problem is appreciated. If you have questions, comments, or seek clarification, please contact the [CHiMaD phase field community]({{ site.baseurl }}/community/) through the [Gitter chat channel]({{ site.links.chat }}) or by [email]({{ site.baseurl }}/mailing_list/). If you found an error, please file an [issue on GitHub]({{ site.links.github }}/issues/new)."
    ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "metadata": {
-    "collapsed": true
-   },
-   "outputs": [],
-   "source": []
   }
  ],
  "metadata": {
   "anaconda-cloud": {},
   "kernelspec": {
-   "display_name": "Python 3",
+   "display_name": "Python 3 (ipykernel)",
    "language": "python",
    "name": "python3"
   },
@@ -1047,7 +1082,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.6.4"
+   "version": "3.9.16"
   }
  },
  "nbformat": 4,