bPCAfill

bPCAfill is a Python module that implements the bPCA imputation method developed by Oba et al. [1]. It provides the imputation function bpca_fill, which is a minor modification of a function found in the module sciblox, which is in turn based on the original Matlab implementation by S. Oba.

References

[1] S. Oba, M. Sato, I. Takemasa, M. Monden, K. Matsubara, S. Ishii, A Bayesian missing value estimation method for gene expression profile data, Bioinformatics, 19 (2003), Issue 16, 2088–2096, https://doi.org/10.1093/bioinformatics/btg287