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CELLxGENE Cell Census

Status: Unstable, under rapid development

This repository contains documentation and example code related to the Chan Zuckerberg CELLxGENE Cell Census, and a client (API) package to simplify accessing the Cell Census data.

The CZ Cell Census is an aggregation of all public single cell data available in CELLxGENE Discover, published in API-accessible formats, including the SOMA API.

Reuse

The contents of this Github repository are freely available for reuse under the MIT license. Data in the CZ Cell Census are available for re-use under the CC-BY license.

For More Help

Please file a issue on this repo, or contact us at [email protected]

Security

If you believe you have found a security issue, we would appreciate notification. Please send email to [email protected].

Code of Conduct

This project adheres to the Contributor Covenant code of conduct. By participating, you are expected to uphold this code. Please report unacceptable behavior to [email protected].

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  • Jupyter Notebook 96.9%
  • Python 3.0%
  • Shell 0.1%