[pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

flint/bandpass.py

@@ -1,5 +1,4 @@
-"""Procedure to calibrate bandpass observation
-"""
+"""Procedure to calibrate bandpass observation"""
 
 from argparse import ArgumentParser
 from pathlib import Path

flint/calibrate/aocalibrate.py

@@ -1,5 +1,4 @@
-"""Code to use AO calibrate s
-"""
+"""Code to use AO calibrate s"""
 
 from __future__ import annotations  # used to keep mypy/pylance happy in AOSolutions
 
@@ -964,7 +963,7 @@ def flag_aosolutions(
         )
         for pol in (0, 3):
             logger.info(f"Processing {pols[pol]} polarisation")
-            
+
             for ant in range(solutions.nant):
                 if ant == ref_ant:
                     logger.info(f"Skipping reference antenna = ant{ref_ant:02}")

flint/coadd/linmos.py

@@ -1,5 +1,5 @@
-"""This is an interface into the yandasoft linmos task.
-"""
+"""This is an interface into the yandasoft linmos task."""
+
 from argparse import ArgumentParser
 from pathlib import Path
 from typing import Collection, List, NamedTuple, Optional

flint/configuration.py

@@ -3,6 +3,7 @@
 be used to specify the options for imaging and self-calibration
 throughout the pipeline.
 """
+
 from argparse import ArgumentParser
 from pathlib import Path
 from typing import Any, Dict, Optional

flint/convol.py

@@ -1,6 +1,7 @@
 """Tooling related to the convolution of images. Principally
 this is mostly to smooth to a common resolution
 """
+
 from __future__ import annotations
 
 import warnings

flint/flagging.py

@@ -1,5 +1,4 @@
-"""Utility functions to carry out flagging against ASKAP measurement sets
-"""
+"""Utility functions to carry out flagging against ASKAP measurement sets"""
 
 from argparse import ArgumentParser
 from pathlib import Path

flint/imager/wsclean.py

@@ -1,5 +1,4 @@
-"""Simple interface into wsclean
-"""
+"""Simple interface into wsclean"""
 
 from __future__ import annotations
 

flint/masking.py

@@ -1,6 +1,7 @@
 """Utility functions to make image based masks from images, with the initial
 thought being towards FITS images.
 """
+
 from argparse import ArgumentParser
 from pathlib import Path
 from typing import Tuple

flint/ms.py

@@ -1,5 +1,4 @@
-"""Operations related to measurement sets
-"""
+"""Operations related to measurement sets"""
 
 from __future__ import (  # Used for mypy/pylance to like the return type of MS.with_options
     annotations,

flint/naming.py

@@ -1,6 +1,7 @@
 """Attempts to centralise components to do with naming of pipeline files and data
 products.
 """
+
 import re
 from pathlib import Path
 from typing import Any, List, NamedTuple, Optional, Union

flint/prefect/common/utils.py

@@ -1,5 +1,5 @@
-"""Common prefect related utilities that can be used between flows.
-"""
+"""Common prefect related utilities that can be used between flows."""
+
 import base64
 from pathlib import Path
 from typing import Any, List, Optional, TypeVar

flint/prefect/flows/continuum_mask_pipeline.py

@@ -12,6 +12,7 @@
 that the best way to do this would be to use a header from the preivous
 imaging round.
 """
+
 from argparse import ArgumentParser
 from pathlib import Path
 from typing import Any, Union

flint/prefect/flows/continuum_pipeline.py

@@ -164,7 +164,9 @@ def process_science_fields(
         wsclean_container=field_options.wsclean_container,
         update_wsclean_options=unmapped(wsclean_init),
     )
-    beam_summaries = task_create_beam_summary.map(ms=flagged_mss, imageset=wsclean_cmds, wait_for=[field_summary])
+    beam_summaries = task_create_beam_summary.map(
+        ms=flagged_mss, imageset=wsclean_cmds, wait_for=[field_summary]
+    )
     if run_aegean:
         beam_aegean_outputs = task_run_bane_and_aegean.map(
             image=wsclean_cmds,
@@ -242,7 +244,7 @@ def process_science_fields(
             "nmiter": 20,
             "force_mask_rounds": 17,
             "minuvw_m": 235,
-            "auto_mask": 8.,
+            "auto_mask": 8.0,
             "local_rms_window": 55,
             "multiscale_scales": (0, 15, 30, 40, 50, 60, 70, 120, 240, 480),
         },
@@ -285,9 +287,8 @@ def process_science_fields(
             round=round,
             update_gain_cal_options=unmapped(gain_cal_options),
             archive_input_ms=field_options.zip_ms,
-            wait_for=[
-                field_summary
-            ] + beam_summaries,  # To make sure field summary is created with unzipped MSs
+            wait_for=[field_summary]
+            + beam_summaries,  # To make sure field summary is created with unzipped MSs
         )
         wsclean_cmds = task_wsclean_imager.map(
             in_ms=cal_mss,

flint/sclient.py

@@ -1,5 +1,5 @@
-"""Utilities related to running commands in a singularity container
-"""
+"""Utilities related to running commands in a singularity container"""
+
 from pathlib import Path
 from socket import gethostname
 from subprocess import CalledProcessError

flint/source_finding/aegean.py

@@ -1,5 +1,5 @@
-"""A basic interface into aegean source finding routines.
-"""
+"""A basic interface into aegean source finding routines."""
+
 from argparse import ArgumentParser
 from pathlib import Path
 from typing import NamedTuple, Tuple

flint/summary.py

@@ -1,5 +1,5 @@
-"""Summary containers intended to hold general information obtained throughout a processing run.
-"""
+"""Summary containers intended to hold general information obtained throughout a processing run."""
+
 from __future__ import (  # Used for mypy/pylance to like the return type of MS.with_options
     annotations,
 )

tests/test_aocalibrate.py

@@ -1,5 +1,4 @@
-"""Some tests related to using aoccalibrate related things
-"""
+"""Some tests related to using aoccalibrate related things"""
 
 import shutil
 from pathlib import Path

tests/test_bandpass_flow.py

@@ -1,5 +1,4 @@
-"""Basic tests for the prefect bandpass flow
-"""
+"""Basic tests for the prefect bandpass flow"""
 
 # this pirate made a promise that if there is a typo and an error
 # then a test will be made to not let it happen. Penaalty is walking

tests/test_bptools.py

@@ -1,5 +1,4 @@
-"""Itemss around testing components of bptools
-"""
+"""Itemss around testing components of bptools"""
 
 import numpy as np
 import pytest

tests/test_naming.py

@@ -1,5 +1,5 @@
-"""Some tests related to components around measurement sets.
-"""
+"""Some tests related to components around measurement sets."""
+
 from pathlib import Path
 
 from flint.naming import (

tests/test_options.py

@@ -2,6 +2,7 @@
 somewhat tracked, especially when using an argparse object
 to create it
 """
+
 from pathlib import Path
 
 from flint.options import FieldOptions

tests/test_utils.py

@@ -1,5 +1,4 @@
-"""Basic tests for utility functions
-"""
+"""Basic tests for utility functions"""
 
 from pathlib import Path
 

tests/test_validation.py

@@ -1,5 +1,4 @@
-"""Items related to test functions in the validation stage of flint
-"""
+"""Items related to test functions in the validation stage of flint"""
 
 from pathlib import Path
 from typing import NamedTuple

tests/test_wsclean.py

@@ -1,5 +1,5 @@
-"""Testing some wsclean functionality.
-"""
+"""Testing some wsclean functionality."""
+
 from pathlib import Path
 
 import pytest