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Utility scripts to download all complete, latest, and representative RefSeq genomes with one representative per taxonomic rank of interest according to NCBI Taxonomy database.

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repr-genome-download

Utility scripts to download all complete, latest, and representative RefSeq genomes with one representative per taxonomic rank of interest according to NCBI Taxonomy database. Taxonomic rank can be [superkingdom, phylum, class, order, family, genus, species]

Usage

bash repr-genome-download.sh [DOWNLOAD_DIR_PATH] [TAXONOMY_RANK]

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Utility scripts to download all complete, latest, and representative RefSeq genomes with one representative per taxonomic rank of interest according to NCBI Taxonomy database.

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