Update notebooks for Build 13 #130
Workflow file for this run
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| name: test | |
| on: | |
| push: | |
| paths: | |
| - '**/*.ipynb' | |
| - '**/*.yml' | |
| - '**/*.yaml' | |
| - '**/*.py' | |
| pull_request: | |
| paths: | |
| - '**/*.ipynb' | |
| - '**/*.yml' | |
| - '**/*.yaml' | |
| - '**/*.py' | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| jobs: | |
| build: | |
| name: build environment | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/cache@v3 | |
| with: | |
| path: | | |
| ~/conda_pkgs_dir | |
| /usr/share/miniconda/envs/roman-data-workshop-env | |
| key: conda-${{ runner.os }}-${{ hashFiles('00_install/environment.yml') }}-${{ github.sha }} | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: roman-data-workshop-env | |
| environment-file: 00_install/environment.yml | |
| use-only-tar-bz2: true | |
| - run: python ./00_install/verify_install.py | |
| - run: conda env export > roman-data-workshop-env-${{ github.sha }}.yml | |
| - uses: actions/[email protected] | |
| with: | |
| name: roman-data-workshop-env-${{ github.sha }}.yml | |
| path: roman-data-workshop-env-${{ github.sha }}.yml | |
| data: | |
| name: download data | |
| needs: [ build ] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/cache@v3 | |
| id: data_cache | |
| with: | |
| path: data/ | |
| key: data-${{ hashFiles('data/download.py') }} | |
| - uses: actions/cache@v3 | |
| with: | |
| path: | | |
| ~/conda_pkgs_dir | |
| /usr/share/miniconda/envs/roman-data-workshop-env | |
| key: conda-${{ runner.os }}-${{ hashFiles('00_install/environment.yml') }}-${{ github.sha }} | |
| if: steps.data_cache.outputs.cache-hit != 'true' | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: roman-data-workshop-env | |
| environment-file: 00_install/environment.yml | |
| use-only-tar-bz2: true | |
| if: steps.data_cache.outputs.cache-hit != 'true' | |
| - run: python data/download.py | |
| if: steps.data_cache.outputs.cache-hit != 'true' | |
| test: | |
| name: run notebooks | |
| needs: [ build, data ] | |
| runs-on: ubuntu-latest | |
| env: | |
| CRDS_SERVER_URL: https://roman-crds-test.stsci.edu | |
| CRDS_PATH: ~/crds_cache | |
| CRDS_CLIENT_RETRY_COUNT: 3 | |
| CRDS_CLIENT_RETRY_DELAY_SECONDS: 20 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/cache@v3 | |
| with: | |
| path: | | |
| ~/conda_pkgs_dir | |
| /usr/share/miniconda/envs/roman-data-workshop-env | |
| key: conda-${{ runner.os }}-${{ hashFiles('00_install/environment.yml') }}-${{ github.sha }} | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: roman-data-workshop-env | |
| environment-file: 00_install/environment.yml | |
| use-only-tar-bz2: true | |
| - run: echo "::set-output name=crds_context::$(crds list --operational-context)" | |
| id: crds_context | |
| - uses: actions/cache@v3 | |
| with: | |
| path: ${{ env.CRDS_PATH }} | |
| key: crds-jwst-datamodels-${{ steps.crds_context.outputs.crds_context }} | |
| if: steps.crds_context.outputs.crds_context != '' | |
| - run: crds sync --contexts ${{ steps.crds_context.outputs.crds_context }} | |
| if: steps.crds_context.outputs.crds_context != '' | |
| - uses: actions/cache@v3 | |
| with: | |
| path: data/ | |
| key: data-${{ hashFiles('data/download.py') }} | |
| - run: python data/download.py | |
| - run: pip install nbcollection | |
| - run: python -m nbcollection execute . |