address deprecation warnings in CI workflows #144
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: test | |
| on: | |
| push: | |
| paths: | |
| - '**/*.ipynb' | |
| - '**/*.yml' | |
| - '**/*.yaml' | |
| - '**/*.py' | |
| pull_request: | |
| paths: | |
| - '**/*.ipynb' | |
| - '**/*.yml' | |
| - '**/*.yaml' | |
| - '**/*.py' | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| jobs: | |
| build: | |
| name: build environment | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/cache@v4 | |
| with: | |
| path: | | |
| ~/conda_pkgs_dir | |
| /usr/share/miniconda/envs/roman-data-workshop-env | |
| key: conda-${{ runner.os }}-${{ hashFiles('00_install/environment.yml') }}-${{ github.sha }} | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| activate-environment: roman-data-workshop-env | |
| environment-file: 00_install/environment.yml | |
| use-only-tar-bz2: true | |
| - run: python ./00_install/verify_install.py | |
| - run: conda env export > roman-data-workshop-env-${{ github.sha }}.yml | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: roman-data-workshop-env-${{ github.sha }}.yml | |
| path: roman-data-workshop-env-${{ github.sha }}.yml | |
| data: | |
| name: download data | |
| needs: [ build ] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/cache@v4 | |
| id: data_cache | |
| with: | |
| path: data/ | |
| key: data-${{ hashFiles('data/download.py') }} | |
| - uses: actions/cache@v4 | |
| with: | |
| path: | | |
| ~/conda_pkgs_dir | |
| /usr/share/miniconda/envs/roman-data-workshop-env | |
| key: conda-${{ runner.os }}-${{ hashFiles('00_install/environment.yml') }}-${{ github.sha }} | |
| if: steps.data_cache.outputs.cache-hit != 'true' | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| activate-environment: roman-data-workshop-env | |
| environment-file: 00_install/environment.yml | |
| use-only-tar-bz2: true | |
| if: steps.data_cache.outputs.cache-hit != 'true' | |
| - run: python data/download.py | |
| if: steps.data_cache.outputs.cache-hit != 'true' | |
| crds_contexts: | |
| uses: spacetelescope/crds/.github/workflows/contexts.yml@master | |
| test: | |
| name: run notebooks | |
| needs: [ build, data, crds_contexts ] | |
| runs-on: ubuntu-latest | |
| env: | |
| CRDS_SERVER_URL: https://roman-crds.stsci.edu | |
| CRDS_PATH: /tmp/data/crds_cache | |
| CRDS_CLIENT_RETRY_COUNT: 3 | |
| CRDS_CLIENT_RETRY_DELAY_SECONDS: 20 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/cache@v4 | |
| with: | |
| path: | | |
| ~/conda_pkgs_dir | |
| /usr/share/miniconda/envs/roman-data-workshop-env | |
| key: conda-${{ runner.os }}-${{ hashFiles('00_install/environment.yml') }}-${{ github.sha }} | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| activate-environment: roman-data-workshop-env | |
| environment-file: 00_install/environment.yml | |
| use-only-tar-bz2: true | |
| - uses: actions/cache@v4 | |
| with: | |
| path: ${{ env.CRDS_PATH }} | |
| key: crds-${{ needs.crds_contexts.outputs.roman }} | |
| - run: crds sync --contexts ${{ needs.crds_contexts.outputs.roman }} | |
| - uses: actions/cache@v4 | |
| with: | |
| path: data/ | |
| key: data-${{ hashFiles('data/download.py') }} | |
| - run: python data/download.py | |
| - run: pip install nbcollection | |
| - run: python -m nbcollection execute . |