Integrate new version of the model that jointly models the competing risk incidences #253
Workflow file for this run
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name: Tests | |
on: | |
push: | |
branches: | |
- "main" | |
pull_request: | |
branches: | |
- '*' | |
jobs: | |
run-linters: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python 3.11 | |
uses: actions/setup-python@v4 | |
with: | |
python-version: "3.11" | |
allow-prereleases: true | |
- name: Run the linters via pre-commit | |
run: | | |
python -m pip install pre-commit | |
pre-commit run --all-files | |
test-pypi: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
include: | |
- python-version: "3.9" | |
nox-session: test_oldest_from_pypi | |
- python-version: "3.9" | |
nox-session: test_latest_from_pypi | |
- python-version: "3.10" | |
nox-session: test_latest_from_pypi | |
- python-version: "3.11" | |
nox-session: test_latest_from_pypi | |
- python-version: "3.12" | |
nox-session: test_latest_from_pypi | |
fail-fast: false | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
allow-prereleases: true | |
- name: Setup test env and run the tests | |
run: | | |
python -m pip install nox | |
nox -s ${{ matrix.nox-session }} -p ${{ matrix.python-version }} | |
# TODO: collect code coverage data and upload to codecov | |
test-conda-forge: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
include: | |
- python-version: "3.12" | |
nox-session: test_latest_from_conda_forge | |
fail-fast: false | |
steps: | |
- uses: actions/checkout@v3 | |
- uses: mamba-org/setup-micromamba@v1 | |
with: | |
init-shell: bash | |
cache-environment: true | |
post-cleanup: 'all' | |
environment-name: nox-env | |
create-args: >- | |
python=${{ matrix.python-version }} | |
nox | |
mamba | |
- name: Setup test env and run the tests | |
run: | | |
nox -s ${{ matrix.nox-session }} -p ${{ matrix.python-version }} | |
shell: bash -el {0} | |
# TODO: collect code coverage data and upload to codecov |