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Anthony edited this page Nov 16, 2020 · 2 revisions

Welcome to the Spritz wiki!

Spritz

Software for RNA-Seq analysis on Windows, including creating sample-specific proteoform databases from genomic data

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Spritz uses snakemake and Docker to install and run commandline tools for Next-Generation Sequencing (NGS) analysis.

Spritz can be downloaded here.

image

Wiki contents

GUI stuff

  1. How to allocate resources to Docker using WSL2 (recommended)
  2. How to allocate resources to Docker using Vmmem (alternate)

Commandline stuff

  1. Commandline usage
  2. How to amend the config.yaml file for commandline usage
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