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Support for parsing and simulating .DATA files #69

Support for parsing and simulating .DATA files

Support for parsing and simulating .DATA files #69

Triggered via pull request August 7, 2023 11:16
@moynermoyner
opened #19
parse
Status Success
Total duration 50m 12s
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on: pull_request
Matrix: test
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4 errors and 11 warnings
Documentation: ../../../.julia/packages/Jutul/zP6JS/src/units/interface.jl#L64
doctest failure in ~/.julia/packages/Jutul/zP6JS/src/units/interface.jl:64-67 ```jldoctest julia> meter, hour = si_units(:meter, :hour) (1.0, 3600.0) ``` Subexpression: meter, hour = si_units(:meter, :hour) Evaluated output: ERROR: UndefVarError: `si_units` not defined Stacktrace: [1] top-level scope @ none:1 Expected output: (1.0, 3600.0) diff = Warning: Diff output requires color. (1.0, 3600.0)ERROR: UndefVarError: `si_units` not defined Stacktrace: [1] top-level scope @ none:1
Documentation: ../../../.julia/packages/Jutul/zP6JS/src/units/interface.jl#L35
doctest failure in ~/.julia/packages/Jutul/zP6JS/src/units/interface.jl:35-38 ```jldoctest julia> convert_from_si(3600.0, :hour) # Get 3600 s represented as hours 1.0 ``` Subexpression: convert_from_si(3600.0, :hour) # Get 3600 s represented as hours Evaluated output: ERROR: UndefVarError: `convert_from_si` not defined Stacktrace: [1] top-level scope @ none:1 Expected output: 1.0 diff = Warning: Diff output requires color. 1.0ERROR: UndefVarError: `convert_from_si` not defined Stacktrace: [1] top-level scope @ none:1
Documentation: ../../../.julia/packages/Jutul/zP6JS/src/units/interface.jl#L81
doctest failure in ~/.julia/packages/Jutul/zP6JS/src/units/interface.jl:81-84 ```jldoctest julia> si_unit(:day) # Get days represented as seconds 86400.0 ``` Subexpression: si_unit(:day) # Get days represented as seconds Evaluated output: ERROR: UndefVarError: `si_unit` not defined Stacktrace: [1] top-level scope @ none:1 Expected output: 86400.0 diff = Warning: Diff output requires color. 86400.0ERROR: UndefVarError: `si_unit` not defined Stacktrace: [1] top-level scope @ none:1
Documentation: ../../../.julia/packages/Jutul/zP6JS/src/units/interface.jl#L8
doctest failure in ~/.julia/packages/Jutul/zP6JS/src/units/interface.jl:8-11 ```jldoctest julia> convert_to_si(1.0, :hour) # Get 1 hour represented as seconds 3600.0 ``` Subexpression: convert_to_si(1.0, :hour) # Get 1 hour represented as seconds Evaluated output: ERROR: UndefVarError: `convert_to_si` not defined Stacktrace: [1] top-level scope @ none:1 Expected output: 3600.0 diff = Warning: Diff output requires color. 3600.0ERROR: UndefVarError: `convert_to_si` not defined Stacktrace: [1] top-level scope @ none:1
Julia 1.9 - ubuntu-latest - x64 - pull_request
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, codecov/codecov-action@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
no doc found for reference '[`TotalMasses`](@ref)' in src/usage/systems.md.
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
no doc found for reference '[`apply_forces_to_equation!`](@ref)' in src/usage/systems.md.
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
no doc found for reference '[`update_cross_term_in_entity!`](@ref)' in src/usage/systems.md.
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
no doc found for reference '[`ImmiscibleSaturation`](@ref)' in src/usage/systems.md.
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
no doc found for reference '[`BlackOilUnknown`](@ref)' in src/usage/systems.md.
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
no doc found for reference '[`ImmiscibleSaturation`](@ref)' in src/usage/systems.md.
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
no doc found for reference '[`ThermalSystem`](@ref)' in src/usage/systems.md.
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
reference for 'Pressure' could not be found in src/internals.md.
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
reference for 'Saturations' could not be found in src/internals.md.
Documentation: ../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
167 docstrings not included in the manual: Jutul.EntityMajorLayout Jutul.BlockMajorLayout Jutul.update_secondary_variable! :: Tuple{Any, Any, Any, Any, Any, Vararg{Any}} Jutul.JutulEquation Jutul.TPFA Jutul.update_linearized_system! :: Union{Tuple{Any, JutulModel}, Tuple{Any, JutulModel, Any}} Jutul.convergence_criterion :: Tuple{Any, Any, JutulEquation, Any, Any} Jutul.cell_index :: Tuple{Any, Tuple} Jutul.partition :: Union{Tuple{AbstractMatrix, Any}, Tuple{AbstractMatrix, Any, Any}} Jutul.solve_adjoint_sensitivities :: NTuple{4, Any} Jutul.get_parameters :: Tuple{SimulationModel} Jutul.setup_storage :: Tuple{JutulModel} Jutul.initialize_extra_state_fields! :: Tuple{Any, JutulModel} Jutul.number_of_values :: Union{Tuple{Any}, Tuple{Any, Any}} Jutul.get_primary_variables :: Tuple{SimulationModel} Jutul.subvariable :: Tuple{Any, Any} Jutul.get_entity_tag :: Tuple{Any, Any} Jutul.TwoPointFiniteVolumeGeometry Jutul.as_value :: Union{Tuple{AbstractArray{D}}, Tuple{D}} where D<:ForwardDiff.Dual Jutul.get_variables :: Tuple{SimulationModel} Jutul.ParallelCSRContext Jutul.declare_pattern :: Tuple{Any, Any, Any, Any, Vararg{Any}} Jutul.transfer :: Tuple{Any, Any} Jutul.HalfFaces Jutul.initialize_context! :: NTuple{4, Any} Jutul.DiscretizedDomain :: Union{Tuple{JutulDomain}, Tuple{JutulDomain, Any}} Jutul.load_balanced_endpoint :: Tuple{Any, Any, Any} Jutul.JutulConfig :: Union{Tuple{}, Tuple{Any}} Jutul.DefaultContext Jutul.apply_forces_to_equation! :: NTuple{7, Any} Jutul.number_of_cells :: Tuple{JutulMesh} Jutul.replace_variables! :: Tuple{Any} Jutul.solve_adjoint_sensitivities! :: NTuple{6, Any} Jutul.si_units :: Tuple Jutul.local_residual_view :: NTuple{4, Any} Jutul.number_of_equations :: Tuple{Any, JutulEquation} Jutul.extra_debug_output! :: NTuple{6, Any} Jutul.compute_half_face_trans :: Tuple{DataDomain, Any} Jutul.solve_numerical_sensitivities :: NTuple{5, Any} Jutul.GroupWisePreconditioner Jutul.number_of_entities :: Tuple{Any, JutulEquation} Jutul.number_of_entities :: Tuple{T} where T<:(AbstractVector) Jutul.number_of_entities :: Tuple{Any, JutulVariables} Jutul.number_of_entities :: Tuple{JutulAutoDiffCache} Jutul.number_of_entities :: Tuple{T} where T<:AbstractArray Jutul.@jutul_secondary :: Tuple{Any} Jutul.update_equations_and_apply_forces! :: NTuple{4, Any} Jutul.tpfv_geometry Jutul.ScalarVariable Jutul.associated_entity :: Tuple{JutulEquation} Jutul.associated_entity :: Tuple{JutulVariables} Jutul.setup_adjoint_storage :: Tuple{Any} Jutul.global_cell :: Tuple{Any, Any} Jutul.number_of_degrees_of_freedom :: Tuple{JutulModel} Jutul.CartesianMesh Jutul.local_cell :: Tuple{Any, Any} Jutul.JutulAutoDiffCache Jutul.IndirectionMap Jutul.JutulDiscretization :: Union{Tuple{Any}, Tuple{Any, Any}} Jutul.JutulDiscretization Jutul.linear_timestep_selection :: Union{NTuple{5, Any}, NTuple{6, Any}} Jutul.update_linearized_system_equation! :: Tuple{Any, Any, Any, JutulEquation, CompactAutoDiffCache} Jutul.add_option! :: Union{Tuple{JutulConfig, Symbol, Any}, Tuple{JutulConfig, Symbol, Any, Any}, Tuple{JutulConfig, Symbol, Any, Any, Any}} Jutul.number_of_equations_per_entity :: Tuple{JutulModel, JutulEquation} Jutul.update_equations! :: Union{Tuple{Any, Any}, Tuple{Any, Any, Any}} Jutul.compute_boundary_trans :: Tuple{DataDomain, Any} Jutul.values_per_entity :: Tuple{Any, JutulVariables} Jutul.coord_offset :: Tuple{Any, AbstractFloat} Jutul.JutulCase :: Union{Tuple{Any}, Tuple{Any, Any}, Tuple{Any, Any, Any}} Jutul.maximum_value :: Tuple{JutulVariables} Jutul.unsafe_reinterpret :: Tuple{Any, Any, Any} Jutul.global_face :: Tuple{Any, Any} Jutul.absolute_increment_limit :: Tuple{JutulVariables} Jutul.update_values! :: Tuple{AbstractArray{<:Real}, AbstractArray{<:Real}} Jutul.update_values! :: Tuple{AbstractArray, AbstractArray} J