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Create interproscan container.yaml #179

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12 changes: 12 additions & 0 deletions quay.io/pawsey/interproscan/container.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,12 @@
docker: quay.io/sarahbeecroft9/interproscan
url: https://quay.io/sarahbeecroft9/interproscan
maintainer: '@sarahbeecroft'
description: Interproscan software v5.56-89.0, which run the scanning algorithms from the InterPro database in an integrated way.
latest:
'5.56-89.0': sha256:ffd13641d13632fb254cd90bae14fbb8332e86d0fbb214ba0074c3fd68fe0070
tags:
'5.56-89.0': sha256:ffd13641d13632fb254cd90bae14fbb8332e86d0fbb214ba0074c3fd68fe0070
aliases:
- name: interproscan.sh
command: /usr/local/interproscan/interproscan.sh
singularity_options: -B /scratch/references/interproscan-5.56-89.0/data:/usr/local/interproscan/data
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This looks good, and this looks to be the one center-specific option that we might not want to add to the central, shared recipe (not everyone will have that path at scratch!)

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Thanks Vanessa! I agree, it's very much Setonix-centric and wouldn't work for everyone, although maybe they could copy this approach if they like.

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Maybe an intermediate is to provide the line, but commented as an example?