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@sheffield-bioinformatics-core

Sheffield Bioinformatics Core

Bioinformatics Core at The University of Sheffield

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  1. periscope periscope Public

    A tool to quantify sub-genomic RNA (sgRNA) expression in SARS-CoV-2 artic network amplicon nanopore sequencing data.

    Python 17 6

  2. sheffield-bioinformatics-core.github.io sheffield-bioinformatics-core.github.io Public

    Forked from mmistakes/so-simple-theme

    Website for The University of Sheffield Bioinformatics Core

    HTML 6 14

  3. spatial_transcriptomics_tutorial spatial_transcriptomics_tutorial Public

    A bare bones tutorial on how to analyse spatial transcriptomics data from raw sequencing reads to visualising spatially distinct features

    HTML 4

  4. RNAseq-R RNAseq-R Public

    Forked from bioinformatics-core-shared-training/RNAseq-R

    RNAseq analysis in R workshop

    HTML 3 2

  5. mMinION mMinION Public

    mitochondrial minION data analysis pipeline

    Python 3

  6. microarray-analysis microarray-analysis Public

    Forked from bioinformatics-core-shared-training/microarray-analysis

    Materials on the analysis of microarray expression data; focus on re-analysis of public data ( http://tinyurl.com/cruk-microarray)

    HTML 2 2

Repositories

Showing 10 of 82 repositories
  • r-online Public

    Online Training Materials for R

    sheffield-bioinformatics-core/r-online’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 1, 2024
  • sheffield-bioinformatics-core.github.io Public Forked from mmistakes/so-simple-theme

    Website for The University of Sheffield Bioinformatics Core

    sheffield-bioinformatics-core/sheffield-bioinformatics-core.github.io’s past year of commit activity
    HTML 6 CC-BY-SA-4.0 2,507 0 3 Updated Oct 4, 2024
  • data_science_bootcamp Public

    R visualisation tutorial for Data Science Bootcamp

    sheffield-bioinformatics-core/data_science_bootcamp’s past year of commit activity
    HTML 0 0 0 0 Updated Jul 28, 2024
  • sheffield-bioinformatics-core/rnaseq-r-online’s past year of commit activity
    HTML 0 CC0-1.0 0 0 0 Updated Jul 24, 2024
  • command-line-bio Public

    New workshop on using command-line for Bioinformatics

    sheffield-bioinformatics-core/command-line-bio’s past year of commit activity
    HTML 0 0 0 0 Updated Jul 13, 2024
  • sheffield-bioinformatics-core/nf-core-nanopath’s past year of commit activity
    Nextflow 1 MIT 0 0 0 Updated Jul 3, 2024
  • Cytoscape_Course Public Forked from a1aks/Cytoscape_Course

    This is a basic cytoscape course intended for beginners to get training with biological network analysis.

    sheffield-bioinformatics-core/Cytoscape_Course’s past year of commit activity
    HTML 0 2 0 0 Updated Jun 12, 2024
  • bacass Public Forked from nf-core/bacass

    Simple bacterial assembly and annotation pipeline

    sheffield-bioinformatics-core/bacass’s past year of commit activity
    Nextflow 0 MIT 42 0 0 Updated May 31, 2024
  • wf-template Public Forked from epi2me-labs/wf-template

    Nextflow workflow template repository

    sheffield-bioinformatics-core/wf-template’s past year of commit activity
    Python 0 30 0 0 Updated May 24, 2024
  • misc_scripts Public

    Repository for miscellaneous scripts created by SBC

    sheffield-bioinformatics-core/misc_scripts’s past year of commit activity
    Shell 0 1 0 0 Updated May 23, 2024

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