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Updated decoupleR install
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PauBadiaM committed Apr 21, 2023
1 parent 7efe592 commit 840f4d9
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1 change: 1 addition & 0 deletions .github/workflows/check-bioc.yml
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Expand Up @@ -166,6 +166,7 @@ jobs:
## Pass #1 at installing dependencies
message(paste('****', Sys.time(), 'pass number 1 at installing dependencies: local dependencies ****'))
remotes::install_github('saezlab/OmnipathR@master', upgrade = FALSE)
remotes::install_github('saezlab/decoupleR@master', upgrade = FALSE)
remotes::install_local(dependencies = TRUE, repos = BiocManager::repositories(), build_vignettes = TRUE, upgrade = TRUE)
continue-on-error: true
shell: Rscript {0}
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