remove extra imports

rs-station · Jun 3, 2024 · 89c23e8 · 89c23e8
1 parent 21e29b2
commit 89c23e8
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Showing 3 changed files with 4 additions and 18 deletions.
diff --git a/src/matchmaps/_compute_mr_diff.py b/src/matchmaps/_compute_mr_diff.py
@@ -3,15 +3,13 @@
 import argparse
 import os
 import sys
-import subprocess
 import time
-from functools import partial
 from pathlib import Path
 
 import gemmi
-import numpy as np
 import reciprocalspaceship as rs
 
+from matchmaps._phenix_utils import rigid_body_refinement_wrapper, phaser_wrapper, _remove_waters
 from matchmaps._utils import (
     _handle_special_positions,
     make_floatgrid_from_mtz,
@@ -25,7 +23,6 @@
     _cif_or_mtz_to_mtz,
     _write_script,
 )
-from matchmaps._phenix_utils import rigid_body_refinement_wrapper, phaser_wrapper, _remove_waters
 
 
 def compute_mr_difference_map(

diff --git a/src/matchmaps/_compute_ncs_diff.py b/src/matchmaps/_compute_ncs_diff.py
@@ -3,20 +3,16 @@
 import argparse
 import os
 import sys
-import subprocess
 import time
-from functools import partial
 from pathlib import Path
 
 import gemmi
-import numpy as np
 import reciprocalspaceship as rs
 
-
+from matchmaps._phenix_utils import rigid_body_refinement_wrapper, _renumber_waters
 from matchmaps._utils import (
     _handle_special_positions,
     make_floatgrid_from_mtz,
-    _realspace_align_and_subtract,
     _rbr_selection_parser,
     _ncs_align_and_subtract,
     _validate_environment,
@@ -26,7 +22,6 @@
     _cif_or_mtz_to_mtz,
     _write_script,
 )
-from matchmaps._phenix_utils import rigid_body_refinement_wrapper, _renumber_waters
 
 
 def compute_ncs_difference_map(

diff --git a/src/matchmaps/_compute_realspace_diff.py b/src/matchmaps/_compute_realspace_diff.py
@@ -1,20 +1,15 @@
 """Compute unbiased real space difference map."""
 
 import argparse
-import os
-import sys
-import glob
 import subprocess
+import sys
 import time
-from functools import partial
 from pathlib import Path
 
 import gemmi
-import numpy as np
 import reciprocalspaceship as rs
 
-from IPython import embed
-
+from matchmaps._phenix_utils import rigid_body_refinement_wrapper, _renumber_waters
 from matchmaps._utils import (
     _handle_special_positions,
     make_floatgrid_from_mtz,
@@ -27,7 +22,6 @@
     _cif_or_pdb_to_pdb,
     _write_script,
 )
-from matchmaps._phenix_utils import rigid_body_refinement_wrapper, _renumber_waters
 
 
 def compute_realspace_difference_map(