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20 Open 12 Closed
20 Open 12 Closed
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Issues list

Remove dataset wrappers in prototype core.py pydata prototype
#39 opened Jun 16, 2020 by eric-czech
Create pytest fixture to parameterize dask scheduler
#37 opened Jun 8, 2020 by tomwhite
PyData prototype package, repo, and directory structure pydata prototype
#32 opened May 20, 2020 by hammer
1
PyData prototype simulation methods
#31 opened May 19, 2020 by eric-czech
5
PyData prototype genetics method implementations pydata prototype
#30 opened May 18, 2020 by eric-czech
7 of 9 tasks
Use of pydantic for PyData prototype? pydata prototype
#28 opened May 2, 2020 by hammer
3
PyData prototype backend dispatching pydata prototype
#24 opened Apr 20, 2020 by eric-czech
3
Define Xarray data structures for PyData prototype pydata prototype
#22 opened Apr 16, 2020 by eric-czech
PyData prototype testing pydata prototype
#21 opened Apr 13, 2020 by eric-czech
Build PyData prototype for GWAS analysis pydata prototype
#20 opened Apr 13, 2020 by eric-czech
12 tasks
3
Try to quantify some assertions
#13 opened Feb 19, 2020 by hammer
3 tasks
Enumerate cohort-specific QC
#12 opened Feb 19, 2020 by hammer
Possibly include qctool in benchmarks
#11 opened Feb 17, 2020 by hammer
Use asv for benchmarks of Dask/Ray prototype
#10 opened Feb 14, 2020 by hammer
1
Try Ray as alternative to Dask in prototype
#9 opened Feb 14, 2020 by hammer
Try sparse arrays in Dask prototypes
#8 opened Feb 12, 2020 by eric-czech
1
Try Python accelerators on Dask prototype
#7 opened Feb 11, 2020 by hammer
1
Try CuPy integration w/ Dask to see what, if any, operations benefit from GPU acceleration
#6 opened Feb 7, 2020 by eric-czech
3
Association tests for large cohorts
#3 opened Jan 30, 2020 by hammer
Include WES and WGS QC workloads
#2 opened Jan 29, 2020 by hammer
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