fix

prototaxites · May 2, 2024 · 59586bd · 59586bd
1 parent 8b621c0
commit 59586bd
Showing 1 changed file with 5 additions and 3 deletions.
diff --git a/subworkflows/annotation.nf b/subworkflows/annotation.nf
@@ -56,6 +56,8 @@ workflow ANNOTATION {
             [ meta, fasta, [] ] 
         }
 
+    ch_predictions_for_eggnog.View()
+
     EGGNOG_MAPPER(
         ch_predictions_for_eggnog,
         eggnog_db
@@ -65,12 +67,12 @@ workflow ANNOTATION {
     ch_annotations_to_merge = EGGNOG_MAPPER.out.annotations
         | groupTuple(by: 0)
 
-    CAT_EMAPPER(ch_annotations_to_merge, 5, "#")
-    ch_versions = ch_versions.mix(CAT_EMAPPER.out.versions)
+    // CAT_EMAPPER(ch_annotations_to_merge, 5, "#")
+    // ch_versions = ch_versions.mix(CAT_EMAPPER.out.versions)
 
     emit:
     contigs      = MMSEQS_EASYCLUSTER.out.rep_fasta
     gff          = params.assemblies_are_genes ? [] : METAEUK_EASYPREDICT.out.gff
-    annotations  = CAT_EMAPPER.out.merged_annotation
+    // annotations  = CAT_EMAPPER.out.merged_annotation
     versions     = ch_versions
 }