CRCIdle - adding min-max memory (#257) #435
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| name: Test Package | |
| on: | |
| workflow_dispatch: | |
| workflow_call: | |
| push: | |
| jobs: | |
| run-tests: | |
| name: Run Tests | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| slurm_version: | |
| - 20.11.9 | |
| - 22.05.11 | |
| - 23.02.5 | |
| python_version: | |
| - 3.9 | |
| container: | |
| image: ghcr.io/pitt-crc/test-env:${{ matrix.slurm_version }} | |
| credentials: | |
| username: ${{ github.actor }} | |
| password: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - name: Setup environment | |
| run: /usr/local/bin/entrypoint.sh | |
| - name: Set Up Bank DB Location | |
| run: mkdir -p /ihome/crc/bank | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| - name: Install Poetry | |
| uses: snok/install-poetry@v1 | |
| with: | |
| virtualenvs-create: false | |
| - name: Install dependencies | |
| run: poetry install --with tests | |
| - name: Run tests with coverage | |
| run: | | |
| poetry run coverage run -m unittest discover | |
| poetry run coverage report --omit="tests/*" | |
| poetry run coverage xml --omit="tests/*" -o coverage.xml | |
| # Report partial coverage results to codacy for the current python version | |
| - name: Report partial coverage results | |
| if: github.event_name != 'release' | |
| shell: bash | |
| run: bash <(curl -Ls https://coverage.codacy.com/get.sh) report --partial -l Python -r coverage.xml | |
| env: | |
| CODACY_PROJECT_TOKEN: ${{ secrets.CODACY_PROJECT_TOKEN }} | |
| # Tell codacy we are done reporting test coverage | |
| report-code-coverage: | |
| name: Report Coverage | |
| if: github.event_name != 'release' | |
| needs: run-tests | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Finish reporting coverage | |
| shell: bash | |
| run: bash <(curl -Ls https://coverage.codacy.com/get.sh) final | |
| env: | |
| CODACY_PROJECT_TOKEN: ${{ secrets.CODACY_PROJECT_TOKEN }} | |
| # Use this job for branch protection rules | |
| report-test-status: | |
| name: Report Test Status | |
| if: always() | |
| needs: run-tests | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check build status | |
| if: ${{ contains(needs.*.result, 'failure') }} | |
| run: exit 1 |