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refactor to cli for messages, fix output for species not in fn #342

refactor to cli for messages, fix output for species not in fn

refactor to cli for messages, fix output for species not in fn #342

Triggered via push August 29, 2024 19:12
Status Failure
Total duration 8m 28s
Artifacts 6

R-CMD-check.yaml

on: push
call-workflow  /  matrix_prep
6s
call-workflow / matrix_prep
Matrix: call-workflow / R-CMD-check
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12 errors and 24 warnings
call-workflow / macOS-latest (release)
Running examples in ‘nwfscSurvey-Ex.R’ failed
call-workflow / macOS-latest (release)
the condition has length > 1
call-workflow / macOS-latest (release)
R CMD check found ERRORs
call-workflow / macOS-latest (release)
Process completed with exit code 1.
call-workflow / ubuntu-latest (release)
Running examples in ‘nwfscSurvey-Ex.R’ failed
call-workflow / ubuntu-latest (release)
the condition has length > 1
call-workflow / ubuntu-latest (release)
R CMD check found ERRORs
call-workflow / ubuntu-latest (release)
Process completed with exit code 1.
call-workflow / windows-latest (release)
Running examples in 'nwfscSurvey-Ex.R' failed
call-workflow / windows-latest (release)
the condition has length > 1
call-workflow / windows-latest (release)
R CMD check found ERRORs
call-workflow / windows-latest (release)
Process completed with exit code 1.
call-workflow / macOS-latest (release)
'::' or ':::' imports not declared from:
call-workflow / macOS-latest (release)
Missing link or links in Rd file 'Biomass.fn.Rd':
call-workflow / macOS-latest (release)
Undocumented code objects:
call-workflow / macOS-latest (release)
Undocumented arguments in Rd file 'SurveyAFs.fn.Rd'
call-workflow / macOS-latest (release)
Pulling all sample types (Life Stage and Size) has resulted in multiple records for unique tows (Trawl_id).
call-workflow / macOS-latest (release)
Pulling all sample types (Life Stage and Size) has resulted in multiple records for unique tows (Trawl_id).
call-workflow / macOS-latest (release)
Pulling all sample types (Life Stage and Size) has resulted in multiple records for unique tows (Trawl_id).
call-workflow / macOS-latest (release)
Pulling all sample types (Life Stage and Size) has resulted in multiple records for unique tows (Trawl_id).
call-workflow / ubuntu-latest (release)
'::' or ':::' imports not declared from:
call-workflow / ubuntu-latest (release)
Missing link or links in Rd file 'Biomass.fn.Rd':
call-workflow / ubuntu-latest (release)
Undocumented code objects:
call-workflow / ubuntu-latest (release)
Undocumented arguments in Rd file 'SurveyAFs.fn.Rd'
call-workflow / ubuntu-latest (release)
Pulling all sample types (Life Stage and Size) has resulted in multiple records for unique tows (Trawl_id).
call-workflow / ubuntu-latest (release)
Pulling all sample types (Life Stage and Size) has resulted in multiple records for unique tows (Trawl_id).
call-workflow / ubuntu-latest (release)
Pulling all sample types (Life Stage and Size) has resulted in multiple records for unique tows (Trawl_id).
call-workflow / ubuntu-latest (release)
Pulling all sample types (Life Stage and Size) has resulted in multiple records for unique tows (Trawl_id).
call-workflow / windows-latest (release)
'::' or ':::' imports not declared from:
call-workflow / windows-latest (release)
Missing link or links in Rd file 'Biomass.fn.Rd':
call-workflow / windows-latest (release)
Undocumented code objects:
call-workflow / windows-latest (release)
Undocumented arguments in Rd file 'SurveyAFs.fn.Rd'
call-workflow / windows-latest (release)
Pulling all sample types (Life Stage and Size) has resulted in multiple records for unique tows (Trawl_id).
call-workflow / windows-latest (release)
Pulling all sample types (Life Stage and Size) has resulted in multiple records for unique tows (Trawl_id).
call-workflow / windows-latest (release)
Pulling all sample types (Life Stage and Size) has resulted in multiple records for unique tows (Trawl_id).
call-workflow / windows-latest (release)
Pulling all sample types (Life Stage and Size) has resulted in multiple records for unique tows (Trawl_id).

Artifacts

Produced during runtime
Name Size
Linux-X64-rrelease-2-results
3.84 MB
Linux-rrelease-results
3.84 MB
Windows-X64-rrelease-0-results
3.84 MB
Windows-rrelease-results
3.84 MB
macOS-ARM64-rrelease-1-results
3.87 MB
macOS-rrelease-results
3.87 MB