FinleyLabUSC

All

18 repositories

Boolean-TME-ABM
Public
Jupyter Notebook
•2•1•0•1•Updated Oct 22, 2024Oct 22, 2024
CRC-Cell-uFBA-Modeling
Public
R
•0•0•0•0•Updated Jun 23, 2024Jun 23, 2024
CRC-Cell-Constraint-Based-Metabolic-Model
Public
MATLAB
•2•1•0•0•Updated May 23, 2024May 23, 2024
Basophil-immune-model
Public
MATLAB
•0•0•0•0•Updated May 1, 2024May 1, 2024
Apoptosis-signaling-heterogeneity
Public
MATLAB
•1•0•0•0•Updated Oct 31, 2023Oct 31, 2023
Early-TME-ABM-PLOS-Comp-Bio
Public
C++
•3•2•1•0•Updated Oct 24, 2023Oct 24, 2023
InfoTheory-NFkB
Public
MATLAB
•0•0•0•0•Updated Sep 16, 2023Sep 16, 2023
FluxSampling_MetabolicInteractions
Public
Flux Sampling in Microbial Metabolic Interactions
MATLAB
•0•1•0•0•Updated Jun 21, 2023Jun 21, 2023
Boolean_TCE_model
Public
R
•2•0•0•0•Updated Jun 20, 2023Jun 20, 2023
M1_M2_MacrophageGEMs
Public
Genome-scale Metabolic Modeling of CRC-associated Macrophage subtypes
MATLAB
•1•0•0•0•Updated May 30, 2023May 30, 2023
Representation-learning-for-ABM-parameter-estimation
Public
C++
•0•0•0•0•Updated Mar 6, 2023Mar 6, 2023
KL-Divergence-Bayesian-Hypothesis-Formation
Public
Python
•
MIT License
•0•0•0•0•Updated Sep 8, 2022Sep 8, 2022
CAR-T-Signaling-in-variability
Public
MATLAB
•0•0•0•0•Updated Jul 13, 2022Jul 13, 2022
CAR-41BB-NFkB-signaling
Public
This repository contains scripts, which were used to analyze CAR-4-1BB-induced canonical NFkB signaling and mutual information.
0•0•0•0•Updated Jul 13, 2022Jul 13, 2022
Anti-angiogenic-treatment-ABM-model
Public
C++
•0•0•0•0•Updated Nov 29, 2021Nov 29, 2021
Endothelial-cell-sprouting-model
Public
MATLAB
•0•0•0•0•Updated Nov 4, 2021Nov 4, 2021
PancreaticBetaCellMetabolism
Public
MATLAB
•0•0•0•0•Updated Oct 11, 2021Oct 11, 2021
JAK-STAT-Regulation-CAMB
Public
Code repository for the manuscript: Dynamic Regulation of JAK-STAT Signaling Through the Prolactin Receptor Predicted by Computational Modeling
MATLAB
•0•0•0•0•Updated Aug 11, 2020Aug 11, 2020