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777 scgpt cell type annotation workflow #785

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jakubmajercik
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Changelog

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Closes #777

Checklist before requesting a review

  • I have performed a self-review of my code

  • Conforms to the Contributor's guide

  • Check the correct box. Does this PR contain:

    • Breaking changes
    • New functionality
    • Major changes
    • Minor changes
    • Documentation
    • Bug fixes
  • Proposed changes are described in the CHANGELOG.md

  • CI tests succeed!

jakubmajercik and others added 26 commits March 18, 2024 15:13
… into 747-generate-scgpt-cross_check_genes-module
…o 747-generate-scgpt-cross_check_genes-module
…ipeline into 772-scgpt-zero-shot-cell-type-annotation
…npipeline into 772-scgpt-zero-shot-cell-type-annotation
…:openpipelines-bio/openpipeline into 777-implement-scgpt-cell-type-annotation-workflow
…com:openpipelines-bio/openpipeline into 777-implement-scgpt-cell-type-annotation-workflow
@dorien-er
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duplicated PR

@dorien-er dorien-er deleted the 777-scgpt-cell-type-annotation-workflow branch April 30, 2024 11:49
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2 participants