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Fix equivalents.
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@seger
seger committed Aug 27, 2022
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Showing 5 changed files with 44 additions and 8 deletions.
2 changes: 0 additions & 2 deletions src/patterns/data/manual/abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv
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Expand Up @@ -42,7 +42,6 @@ http://purl.obolibrary.org/obo/XPO_0136641 decreased apoptosis in zygote GO:0006
http://purl.obolibrary.org/obo/XPO_0136642 decreased apoptosis in animal cap GO:0006915 apoptotic process XAO:0000036 animal cap
http://purl.obolibrary.org/obo/XPO_0136643 decreased apoptosis in animal cap inner layer GO:0006915 apoptotic process XAO:0000037 animal cap inner layer
http://purl.obolibrary.org/obo/XPO_0136644 decreased apoptosis in animal cap outer layer GO:0006915 apoptotic process XAO:0000038 animal cap outer layer
http://purl.obolibrary.org/obo/XPO_0136645 decreased apoptosis in head region GO:0006915 apoptotic process XAO:0000040 head region
http://purl.obolibrary.org/obo/XPO_0136646 decreased apoptosis in epidermis inner layer GO:0006915 apoptotic process XAO:0000041 epidermis inner layer
http://purl.obolibrary.org/obo/XPO_0136647 decreased apoptosis in neuroectoderm GO:0006915 apoptotic process XAO:0000042 neuroectoderm
http://purl.obolibrary.org/obo/XPO_0136648 decreased apoptosis in neuroectoderm outer layer GO:0006915 apoptotic process XAO:0000043 neuroectoderm outer layer
Expand Down Expand Up @@ -1541,7 +1540,6 @@ http://purl.obolibrary.org/obo/XPO_0138192 decreased cell population proliferati
http://purl.obolibrary.org/obo/XPO_0138193 decreased cell population proliferation in animal cap GO:0008283 cell population proliferation XAO:0000036 animal cap
http://purl.obolibrary.org/obo/XPO_0138194 decreased cell population proliferation in animal cap inner layer GO:0008283 cell population proliferation XAO:0000037 animal cap inner layer
http://purl.obolibrary.org/obo/XPO_0138195 decreased cell population proliferation in animal cap outer layer GO:0008283 cell population proliferation XAO:0000038 animal cap outer layer
http://purl.obolibrary.org/obo/XPO_0138196 decreased cell population proliferation in head region GO:0008283 cell population proliferation XAO:0000040 head region
http://purl.obolibrary.org/obo/XPO_0138197 decreased cell population proliferation in epidermis inner layer GO:0008283 cell population proliferation XAO:0000041 epidermis inner layer
http://purl.obolibrary.org/obo/XPO_0138198 decreased cell population proliferation in neuroectoderm GO:0008283 cell population proliferation XAO:0000042 neuroectoderm
http://purl.obolibrary.org/obo/XPO_0138199 decreased cell population proliferation in neuroectoderm outer layer GO:0008283 cell population proliferation XAO:0000043 neuroectoderm outer layer
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2 changes: 0 additions & 2 deletions src/patterns/data/manual/abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv
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Expand Up @@ -37,7 +37,6 @@ http://purl.obolibrary.org/obo/XPO_0133539 increased apoptosis in zygote GO:0006
http://purl.obolibrary.org/obo/XPO_0133540 increased apoptosis in animal cap GO:0006915 apoptotic process XAO:0000036 animal cap
http://purl.obolibrary.org/obo/XPO_0133541 increased apoptosis in animal cap inner layer GO:0006915 apoptotic process XAO:0000037 animal cap inner layer
http://purl.obolibrary.org/obo/XPO_0133542 increased apoptosis in animal cap outer layer GO:0006915 apoptotic process XAO:0000038 animal cap outer layer
http://purl.obolibrary.org/obo/XPO_0133543 increased apoptosis in head region GO:0006915 apoptotic process XAO:0000040 head region
http://purl.obolibrary.org/obo/XPO_0133544 increased apoptosis in epidermis inner layer GO:0006915 apoptotic process XAO:0000041 epidermis inner layer
http://purl.obolibrary.org/obo/XPO_0133545 increased apoptosis in neuroectoderm GO:0006915 apoptotic process XAO:0000042 neuroectoderm
http://purl.obolibrary.org/obo/XPO_0133546 increased apoptosis in neuroectoderm outer layer GO:0006915 apoptotic process XAO:0000043 neuroectoderm outer layer
Expand Down Expand Up @@ -1536,7 +1535,6 @@ http://purl.obolibrary.org/obo/XPO_0135090 increased cell population proliferati
http://purl.obolibrary.org/obo/XPO_0135091 increased cell population proliferation in animal cap GO:0008283 cell population proliferation XAO:0000036 animal cap
http://purl.obolibrary.org/obo/XPO_0135092 increased cell population proliferation in animal cap inner layer GO:0008283 cell population proliferation XAO:0000037 animal cap inner layer
http://purl.obolibrary.org/obo/XPO_0135093 increased cell population proliferation in animal cap outer layer GO:0008283 cell population proliferation XAO:0000038 animal cap outer layer
http://purl.obolibrary.org/obo/XPO_0135094 increased cell population proliferation in head region GO:0008283 cell population proliferation XAO:0000040 head region
http://purl.obolibrary.org/obo/XPO_0135095 increased cell population proliferation in epidermis inner layer GO:0008283 cell population proliferation XAO:0000041 epidermis inner layer
http://purl.obolibrary.org/obo/XPO_0135096 increased cell population proliferation in neuroectoderm GO:0008283 cell population proliferation XAO:0000042 neuroectoderm
http://purl.obolibrary.org/obo/XPO_0135097 increased cell population proliferation in neuroectoderm outer layer GO:0008283 cell population proliferation XAO:0000043 neuroectoderm outer layer
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4 changes: 0 additions & 4 deletions src/patterns/id_map.tsv
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Expand Up @@ -13179,7 +13179,6 @@ GO:0006915-XAO:0000035-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocatio
GO:0006915-XAO:0000036-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0133540
GO:0006915-XAO:0000037-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0133541
GO:0006915-XAO:0000038-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0133542
GO:0006915-XAO:0000040-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0133543
GO:0006915-XAO:0000041-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0133544
GO:0006915-XAO:0000042-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0133545
GO:0006915-XAO:0000043-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0133546
Expand Down Expand Up @@ -14727,7 +14726,6 @@ GO:0008283-XAO:0000035-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocatio
GO:0008283-XAO:0000036-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0135091
GO:0008283-XAO:0000037-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0135092
GO:0008283-XAO:0000038-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0135093
GO:0008283-XAO:0000040-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0135094
GO:0008283-XAO:0000041-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0135095
GO:0008283-XAO:0000042-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0135096
GO:0008283-XAO:0000043-abnormallyIncreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0135097
Expand Down Expand Up @@ -16275,7 +16273,6 @@ GO:0006915-XAO:0000035-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocatio
GO:0006915-XAO:0000036-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0136642
GO:0006915-XAO:0000037-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0136643
GO:0006915-XAO:0000038-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0136644
GO:0006915-XAO:0000040-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0136645
GO:0006915-XAO:0000041-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0136646
GO:0006915-XAO:0000042-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0136647
GO:0006915-XAO:0000043-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0136648
Expand Down Expand Up @@ -17823,7 +17820,6 @@ GO:0008283-XAO:0000035-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocatio
GO:0008283-XAO:0000036-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0138193
GO:0008283-XAO:0000037-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0138194
GO:0008283-XAO:0000038-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0138195
GO:0008283-XAO:0000040-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0138196
GO:0008283-XAO:0000041-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0138197
GO:0008283-XAO:0000042-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0138198
GO:0008283-XAO:0000043-abnormallyDecreasedOccurrenceOfBiologicalProcessInLocation.tsv http://purl.obolibrary.org/obo/XPO_0138199
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40 changes: 40 additions & 0 deletions src/patterns/templates/xpo-replaced.owl
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Expand Up @@ -5080,6 +5080,16 @@



<!-- http://purl.obolibrary.org/obo/XPO_0133543 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/XPO_0133543">
<obo:IAO_0000125 rdf:resource="http://purl.obolibrary.org/obo/XPO_0133942"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete increased apoptosis in head region</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/XPO_0134988 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/XPO_0134988">
Expand All @@ -5100,6 +5110,16 @@



<!-- http://purl.obolibrary.org/obo/XPO_0135094 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/XPO_0135094">
<obo:IAO_0000125 rdf:resource="http://purl.obolibrary.org/obo/XPO_0135493"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete increased cell population proliferation in head region</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/XPO_0136539 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/XPO_0136539">
Expand All @@ -5120,6 +5140,16 @@



<!-- http://purl.obolibrary.org/obo/XPO_0136645 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/XPO_0136645">
<obo:IAO_0000125 rdf:resource="http://purl.obolibrary.org/obo/XPO_0137044"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete decreased apoptosis in head region</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/XPO_0138090 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/XPO_0138090">
Expand All @@ -5140,6 +5170,16 @@



<!-- http://purl.obolibrary.org/obo/XPO_0138196 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/XPO_0138196">
<obo:IAO_0000125 rdf:resource="http://purl.obolibrary.org/obo/XPO_0138595"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete decreased cell population proliferation in head region</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/XPO_0139641 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/XPO_0139641">
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4 changes: 4 additions & 0 deletions src/patterns/templates/xpo-replaced.tsv
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Expand Up @@ -517,3 +517,7 @@ http://purl.obolibrary.org/obo/XPO_0133417 obsolete increased cilium motility in
http://purl.obolibrary.org/obo/XPO_0133418 obsolete increased cilium motility in ciliated non-epidermal cell true http://purl.obolibrary.org/obo/XPO_0142007
http://purl.obolibrary.org/obo/XPO_0133419 obsolete increased cilium motility in monociliated epidermal cell true http://purl.obolibrary.org/obo/XPO_0142008
http://purl.obolibrary.org/obo/XPO_0133420 obsolete increased cilium motility in multiciliated epidermal cell true http://purl.obolibrary.org/obo/XPO_0142009
http://purl.obolibrary.org/obo/XPO_0138196 obsolete decreased cell population proliferation in head region true http://purl.obolibrary.org/obo/XPO_0138595
http://purl.obolibrary.org/obo/XPO_0136645 obsolete decreased apoptosis in head region true http://purl.obolibrary.org/obo/XPO_0137044
http://purl.obolibrary.org/obo/XPO_0133543 obsolete increased apoptosis in head region true http://purl.obolibrary.org/obo/XPO_0133942
http://purl.obolibrary.org/obo/XPO_0135094 obsolete increased cell population proliferation in head region true http://purl.obolibrary.org/obo/XPO_0135493

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