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DO NOT MERGE: just compare #24

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DO NOT MERGE: just compare #24

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04b3fc8
ebi config
matentzn Jan 6, 2020
bd7c299
Merge branch 'master' into devEBI
matentzn Jan 8, 2020
1719acb
Update upheno_pipeline_singularity.sh
matentzn Jan 8, 2020
a0cfc4d
Merge branch 'master' into devEBI
matentzn Jan 8, 2020
4bd7af8
Merge branch 'master' into devEBI
matentzn Jan 9, 2020
adfd774
Merge branch 'master' into devEBI
matentzn Jan 9, 2020
1076abe
Merge branch 'master' into devEBI
matentzn Jan 9, 2020
7e8e6a3
Merge branch 'master' into devEBI
matentzn Jan 10, 2020
2c9a083
Merge branch 'master' into devEBI
matentzn Jan 21, 2020
e89fcc1
Merge branch 'master' into devEBI
matentzn Feb 17, 2020
069f3d3
Merge branch 'master' into devEBI
matentzn Feb 17, 2020
7512c70
Merge branch 'master' into devEBI
matentzn Feb 17, 2020
7d72dcd
Merge branch 'master' into devEBI
matentzn Feb 20, 2020
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6 changes: 3 additions & 3 deletions src/curation/upheno-config.yaml
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Expand Up @@ -6,9 +6,9 @@ report_fail_on: none
use_dosdps: TRUE
dosdp_tools_options: "--obo-prefixes=true --restrict-axioms-to=logical"
robot_opts: -vv
robot_java_args: -Xmx10G
timeout_external_processes: 120m
working_directory: /work/src
robot_java_args: -Xmx50G
timeout_external_processes: 500m
working_directory: /nfs/production3/spot/sw/dev/monarch/data/upheno-dev/src
overwrite_matches: False
skip_pattern_download: True
max_upheno_id: 9999999
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Empty file modified src/scripts/upheno_pipeline_singularity.sh
100644 → 100755
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