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pnrobinson committed Dec 8, 2024
1 parent 7b6fc8a commit d2a485d
Showing 1 changed file with 95 additions and 0 deletions.
95 changes: 95 additions & 0 deletions src/ontology/hp-edit.owl
Original file line number Diff line number Diff line change
@@ -19539,6 +19539,15 @@ Declaration(Class(<http://purl.obolibrary.org/obo/HP_6001143>))
Declaration(Class(<http://purl.obolibrary.org/obo/HP_6001144>))
Declaration(Class(<http://purl.obolibrary.org/obo/HP_6001145>))
Declaration(Class(<http://purl.obolibrary.org/obo/HP_6001146>))
Declaration(Class(<http://purl.obolibrary.org/obo/HP_6001147>))
Declaration(Class(<http://purl.obolibrary.org/obo/HP_6001148>))
Declaration(Class(<http://purl.obolibrary.org/obo/HP_6001149>))
Declaration(Class(<http://purl.obolibrary.org/obo/HP_6001150>))
Declaration(Class(<http://purl.obolibrary.org/obo/HP_6001151>))
Declaration(Class(<http://purl.obolibrary.org/obo/HP_6001152>))
Declaration(Class(<http://purl.obolibrary.org/obo/HP_6001153>))
Declaration(Class(<http://purl.obolibrary.org/obo/HP_6001154>))
Declaration(Class(<http://purl.obolibrary.org/obo/HP_6001155>))
Declaration(Class(<http://purl.obolibrary.org/obo/PATO_0001842>))
Declaration(Class(<http://purl.obolibrary.org/obo/PATO_0001843>))
Declaration(Class(<http://purl.obolibrary.org/obo/PATO_0001844>))
@@ -231712,6 +231721,92 @@ AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/HP_6001146> "MR
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/HP_6001146> "Biceps tendonitis")
SubClassOf(<http://purl.obolibrary.org/obo/HP_6001146> <http://purl.obolibrary.org/obo/HP_0025230>)

# Class: <http://purl.obolibrary.org/obo/HP_6001147> (Increased peripheral nerve cross sectional area)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/HP_6001147> "Ultrasonography showing increased cross sectional area (CSA) of a peripheral nerve as it travels through a potential site of compression.")
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000233> <http://purl.obolibrary.org/obo/HP_6001147> <https://github.com/obophenotype/human-phenotype-ontology/issues/10783>)
AnnotationAssertion(dcterms:contributor <http://purl.obolibrary.org/obo/HP_6001147> <https://orcid.org/0000-0002-0736-9199>)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/HP_6001147> "Peripheral nerve enlargement")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/HP_6001147> "Peripheral nerve swelling")
AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/HP_6001147> "This feature may be observed in conditions such as carpal tunnel syndrome, ulnar tunnel syndrome, cubital tunnel syndrome, and radial tunnel syndrome.")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/HP_6001147> "Increased peripheral nerve cross sectional area")
SubClassOf(<http://purl.obolibrary.org/obo/HP_6001147> <http://purl.obolibrary.org/obo/HP_0000759>)

# Class: <http://purl.obolibrary.org/obo/HP_6001148> (Pain exacerbated by passive flexion at joint)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:25878982") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/HP_6001148> "Pain in extremity that worsens with joint is passively flexed.")
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000233> <http://purl.obolibrary.org/obo/HP_6001148> <https://github.com/obophenotype/human-phenotype-ontology/issues/10786>)
AnnotationAssertion(dcterms:contributor <http://purl.obolibrary.org/obo/HP_6001148> <https://orcid.org/0000-0002-0736-9199>)
AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/HP_6001148> "This feature may be observed in acute compartment syndrome.")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/HP_6001148> "Pain exacerbated by passive flexion at joint")
SubClassOf(<http://purl.obolibrary.org/obo/HP_6001148> <http://purl.obolibrary.org/obo/HP_0025280>)

# Class: <http://purl.obolibrary.org/obo/HP_6001149> (Positive hook test at the elbow)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:32788933") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/HP_6001149> "With forearm fully supinated and elbow flexed to 90 degrees, examiner hooks a finger a bit around the distal biceps tendon at the anterior aspect of the elbow. Test is positive when there is lack of appreciable cord like structure to hook around.")
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000233> <http://purl.obolibrary.org/obo/HP_6001149> <https://github.com/obophenotype/human-phenotype-ontology/issues/10814>)
AnnotationAssertion(dcterms:contributor <http://purl.obolibrary.org/obo/HP_6001149> <https://orcid.org/0000-0002-0736-9199>)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/HP_6001149> "Positive O'Driscoll hook test")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/HP_6001149> "Positive distal biceps hook test")
AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/HP_6001149> "This sign can indicate a distal biceps tendon tear.")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/HP_6001149> "Positive hook test at the elbow")
SubClassOf(<http://purl.obolibrary.org/obo/HP_6001149> <http://purl.obolibrary.org/obo/HP_0034430>)

# Class: <http://purl.obolibrary.org/obo/HP_6001150> (Positive Speed's test)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:9848587") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/HP_6001150> "Manual downward pressure on the arm with the shoulders flexed forward to 90 degrees, elbows fully extended, and palm facing up recreates pain in the anterior shoulder region; named after Dr. Speed.")
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000233> <http://purl.obolibrary.org/obo/HP_6001150> <https://github.com/obophenotype/human-phenotype-ontology/issues/10825>)
AnnotationAssertion(dcterms:contributor <http://purl.obolibrary.org/obo/HP_6001150> <https://orcid.org/0000-0002-0736-9199>)
AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/HP_6001150> "The Speed's test was recorded as positive if the patient experienced pain in the proximal portion of the shoulder during the application of a downward force applied to the arm. The patient's arm was placed with the forearm in full supination at 90 degrees of shoulder elevation. See Figure 1 of PMID:9848587.")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/HP_6001150> "Positive Speed's test")
SubClassOf(<http://purl.obolibrary.org/obo/HP_6001150> <http://purl.obolibrary.org/obo/HP_0033129>)

# Class: <http://purl.obolibrary.org/obo/HP_6001151> (Triangular lunate bone)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:22529764") Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:23616330") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/HP_6001151> "A disruption of the greater and lesser arcs of the lunate bone, with the lunate having a triangular silhouette, know as the piece of pie sign. Often caused by falling on an outstretched hand, patients will have tenderness to palpation over the dorsum of the wrist and may have sensory deficits in the median nerve distribution.")
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000233> <http://purl.obolibrary.org/obo/HP_6001151> <https://github.com/obophenotype/human-phenotype-ontology/issues/10733>)
AnnotationAssertion(dcterms:contributor <http://purl.obolibrary.org/obo/HP_6001151> <https://orcid.org/0000-0002-0736-9199>)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/HP_6001151> "Piece of pie sign of lunate bone")
AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/HP_6001151> "See Figure 3 of PMID:23616330.")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/HP_6001151> "Triangular lunate bone")
SubClassOf(<http://purl.obolibrary.org/obo/HP_6001151> <http://purl.obolibrary.org/obo/HP_0004248>)

# Class: <http://purl.obolibrary.org/obo/HP_6001152> (Pain exacerbated by wrist deviation)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/HP_6001152> "Pain worsens with wrist ulnar or radial deviation.")
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000233> <http://purl.obolibrary.org/obo/HP_6001152> <https://github.com/obophenotype/human-phenotype-ontology/issues/10742>)
AnnotationAssertion(dcterms:contributor <http://purl.obolibrary.org/obo/HP_6001152> <https://orcid.org/0000-0002-0736-9199>)
AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/HP_6001152> "Ulnar: Triangular fibrocartilage complex tear; Ulnocarpal abutment syndrome Radial: Triangular fibrocartilage complex tear.")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/HP_6001152> "Pain exacerbated by wrist deviation")
SubClassOf(<http://purl.obolibrary.org/obo/HP_6001152> <http://purl.obolibrary.org/obo/HP_0025280>)

# Class: <http://purl.obolibrary.org/obo/HP_6001153> (Pain on the lateral aspect of the foot)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/HP_6001153> "An unpleasant sensation characterized by physical discomfort (such as pricking, throbbing, or aching) localized to the side of the foot nearest to the little (fifth) toe.")
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000233> <http://purl.obolibrary.org/obo/HP_6001153> <https://github.com/obophenotype/human-phenotype-ontology/issues/10743>)
AnnotationAssertion(dcterms:contributor <http://purl.obolibrary.org/obo/HP_6001153> <https://orcid.org/0000-0002-0736-9199>)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/HP_6001153> "Lateral foot pain")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/HP_6001153> "Pain on the lateral aspect of the foot")
SubClassOf(<http://purl.obolibrary.org/obo/HP_6001153> <http://purl.obolibrary.org/obo/HP_0025238>)

# Class: <http://purl.obolibrary.org/obo/HP_6001154> (Pain at the medial aspect of the knee)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/HP_6001154> "n unpleasant sensation characterized by physical discomfort (such as pricking, throbbing, or aching) localized to the inner side of knee, that is, the region of the knee that faces the other knee.")
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000233> <http://purl.obolibrary.org/obo/HP_6001154> <https://github.com/obophenotype/human-phenotype-ontology/issues/10744>)
AnnotationAssertion(dcterms:contributor <http://purl.obolibrary.org/obo/HP_6001154> <https://orcid.org/0000-0002-0736-9199>)
AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/HP_6001154> "This feature may be observed with medial collateral ligament knee injury.")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/HP_6001154> "Pain at the medial aspect of the knee")
SubClassOf(<http://purl.obolibrary.org/obo/HP_6001154> <http://purl.obolibrary.org/obo/HP_0030839>)

# Class: <http://purl.obolibrary.org/obo/HP_6001155> (Pain at the lateral aspect of the knee)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/HP_6001155> "An unpleasant sensation characterized by physical discomfort (such as pricking, throbbing, or aching) localized to the outer side of knee, that is, the region of the knee that faces away from the other knee.")
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000233> <http://purl.obolibrary.org/obo/HP_6001155> <https://github.com/obophenotype/human-phenotype-ontology/issues/10745>)
AnnotationAssertion(dcterms:contributor <http://purl.obolibrary.org/obo/HP_6001155> <https://orcid.org/0000-0002-0736-9199>)
AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/HP_6001155> "This feature may be observed with lateral collateral ligament injury.")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/HP_6001155> "Pain at the lateral aspect of the knee")
SubClassOf(<http://purl.obolibrary.org/obo/HP_6001155> <http://purl.obolibrary.org/obo/HP_0030839>)


SubObjectPropertyOf(ObjectPropertyChain(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/BFO_0000050>) <http://purl.obolibrary.org/obo/RO_0002314>)
)

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