Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Important! Template update for nf-core/tools v3.0.2 #545

Open
wants to merge 14 commits into
base: dev
Choose a base branch
from
Open

Important! Template update for nf-core/tools v3.0.2 #545

wants to merge 14 commits into from

Commits on Oct 8, 2024

  1. Template update for nf-core/tools version 3.0.0

    @nf-core-bot
    nf-core-bot committed Oct 8, 2024
    Configuration menu
    Copy the full SHA
    79d1535 View commit details
    Browse the repository at this point in the history

Commits on Oct 9, 2024

  1. Template update for nf-core/tools version 3.0.1

    @nf-core-bot
    nf-core-bot committed Oct 9, 2024
    Configuration menu
    Copy the full SHA
    56e023f View commit details
    Browse the repository at this point in the history

Commits on Oct 11, 2024

  1. Template update for nf-core/tools version 3.0.2

    @nf-core-bot
    nf-core-bot committed Oct 11, 2024
    Configuration menu
    Copy the full SHA
    69969cf View commit details
    Browse the repository at this point in the history

Commits on Oct 17, 2024

  1. resolve the conflicts

    @LilyAnderssonLee
    LilyAnderssonLee committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    226abd9 View commit details
    Browse the repository at this point in the history

  2. remove max_cpu from test.config

    @LilyAnderssonLee
    LilyAnderssonLee committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    ff4d28f View commit details
    Browse the repository at this point in the history

Commits on Oct 18, 2024

  1. update schema wit new release

    @LilyAnderssonLee
    LilyAnderssonLee committed Oct 18, 2024
    Configuration menu
    Copy the full SHA
    f3ef6aa View commit details
    Browse the repository at this point in the history

  2. add exists:true to the sechma to check the file path

    @LilyAnderssonLee
    LilyAnderssonLee committed Oct 18, 2024
    Configuration menu
    Copy the full SHA
    5e90741 View commit details
    Browse the repository at this point in the history

  3. change db_path format back to the original value path in schema_database

    @LilyAnderssonLee
    LilyAnderssonLee committed Oct 18, 2024
    Configuration menu
    Copy the full SHA
    a9af810 View commit details
    Browse the repository at this point in the history

Commits on Oct 22, 2024

  1. update the type of run_accession into string and integer

    @LilyAnderssonLee
    LilyAnderssonLee committed Oct 22, 2024
    Configuration menu
    Copy the full SHA
    9e20ff1 View commit details
    Browse the repository at this point in the history

  2. Update CITATIONS.md 

    Co-authored-by: James A. Fellows Yates <[email protected]>
    @LilyAnderssonLee @jfy133
    LilyAnderssonLee and jfy133 authored Oct 22, 2024
    Configuration menu
    Copy the full SHA
    88c9f46 View commit details
    Browse the repository at this point in the history

  3. Update conf/modules.config 

    Co-authored-by: James A. Fellows Yates <[email protected]>
    @LilyAnderssonLee @jfy133
    LilyAnderssonLee and jfy133 authored Oct 22, 2024
    Configuration menu
    Copy the full SHA
    2900ae2 View commit details
    Browse the repository at this point in the history

  4. address comments from James

    @LilyAnderssonLee
    LilyAnderssonLee committed Oct 22, 2024
    Configuration menu
    Copy the full SHA
    b0c1154 View commit details
    Browse the repository at this point in the history

  5. Update nextflow.config 

    Co-authored-by: James A. Fellows Yates <[email protected]>
    @LilyAnderssonLee @jfy133
    LilyAnderssonLee and jfy133 authored Oct 22, 2024
    Configuration menu
    Copy the full SHA
    340b0af View commit details
    Browse the repository at this point in the history

  6. Add Lili as co-author

    @LilyAnderssonLee
    LilyAnderssonLee committed Oct 22, 2024
    Configuration menu
    Copy the full SHA
    05b743f View commit details
    Browse the repository at this point in the history