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Update nextflow.config
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Co-authored-by: James A. Fellows Yates <[email protected]>
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LilyAnderssonLee and jfy133 authored Oct 22, 2024
1 parent b0c1154 commit 340b0af
Showing 1 changed file with 1 addition and 2 deletions.
3 changes: 1 addition & 2 deletions nextflow.config
Original file line number Diff line number Diff line change
Expand Up @@ -312,8 +312,7 @@ profiles {
includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/nfcore_custom.config" : "/dev/null"

// Load nf-core/taxprofiler custom profiles from different institutions.
// TODO nf-core: Optionally, you can add a pipeline-specific nf-core config at https://github.com/nf-core/configs
// includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/pipeline/taxprofiler.config" : "/dev/null"
includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/pipeline/taxprofiler.config" : "/dev/null"

// Set default registry for Apptainer, Docker, Podman, Charliecloud and Singularity independent of -profile
// Will not be used unless Apptainer / Docker / Podman / Charliecloud / Singularity are enabled
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