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update fusionreport to 2.1.5p6 #432

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Nov 8, 2023
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1 change: 1 addition & 0 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -19,6 +19,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- `--extreme_sensitivity` used for fusioninspector to minimize fusioninspector filtering [#424](https://github.com/nf-core/rnafusion/pull/424)
- `--extreme_sensitivity` removed in favor of `--max_sensitivity --max_mate_dist 10000000 --annotate --examine_coding_effect` to collect more data from fusioninspector [#426](https://github.com/nf-core/rnafusion/pull/426)
- `Arriba` updated to 2.4.0 [#429](https://github.com/nf-core/rnafusion/pull/429)
- Update `fusion-report` to 2.1.5p6 to fix download of references via proxy [#432](https://github.com/nf-core/rnafusion/pull/432)

### Fixed

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3 changes: 1 addition & 2 deletions modules/local/fusionreport/detect/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -2,9 +2,8 @@ process FUSIONREPORT {
tag "$meta.id"
label 'process_medium'

// Note: 2.7X indices incompatible with AWS iGenomes.
conda "bioconda::star=2.7.9a"
container "docker.io/clinicalgenomics/fusion-report:2.1.5p5"
container "docker.io/clinicalgenomics/fusion-report:2.1.5p6"


input:
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3 changes: 1 addition & 2 deletions modules/local/fusionreport/download/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -2,9 +2,8 @@ process FUSIONREPORT_DOWNLOAD {
tag 'fusionreport'
label 'process_medium'

// Note: 2.7X indices incompatible with AWS iGenomes.
conda "bioconda::star=2.7.9a"
container "docker.io/clinicalgenomics/fusion-report:2.1.5p5"
container "docker.io/clinicalgenomics/fusion-report:2.1.5p6"

input:
val(username)
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