Merge branch 'dev' into fusionreport_workflow_nftest

nf-core · Jan 22, 2025 · e138e7f · e138e7f
2 parents 9961a12 + 42ed785
commit e138e7f
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -45,6 +45,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 - Update from ensembl 102 to gencode 46 default references [#505](https://github.com/nf-core/rnafusion/pull/505)
 - Update`FUSIONINSPECTOR` to v2.10.0. [#601](https://github.com/nf-core/rnafusion/pull/601)
 - Remove local module `STARFUSION_DOWNLOAD` [#598](https://github.com/nf-core/rnafusion/pull/598)
+- Fix error message when parameter outdir is missing [#611](https://github.com/nf-core/rnafusion/pull/611)
 
 ### Fixed
 

diff --git a/nextflow.config b/nextflow.config
@@ -15,6 +15,7 @@ params {
     cosmic_username            = null
     cosmic_passwd              = null
     qiagen                     = false
+    outdir                     = null
 
     // MultiQC options
     multiqc_config             = null
@@ -107,7 +108,6 @@ params {
     whitelist                     = null
 
     // Boilerplate options
-    outdir                       = null
     publish_dir_mode             = 'copy'
     email                        = null
     email_on_fail                = null